Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2291 ATGGTACTCCTTCACCTCCCCAAACTCCCTTCAACCATTCTAACTCCGCTATCCTCTTCTCCCATCTTTCTCCGCACTCATTTCCTAAACCCAAATCCAAACGCAACCAAAACCCCTCGCCCCCTTTTACTATTCTCCACCCTAACCCTTCCCGCCTCCGAACCCACACCGATAGACCCTCACACACCCGAACCCACCCCCCACCTCCAACTCCCTCTCCACAAGCTCTTCGTTCCCCCCGAAACCCATGTCCCCCTCGACACCCCTACCCTCACCGCCAGAATCCTCAAGGGCTCCAACATTCTGCTCAGCAACTACGCCACCGACTCTCAGGTGGCGCAAGCGGAGTTCGTCAAGAGCAGTGTTAGGACCGAGGACTGCCCCTCCGATGGCCTCCCTGAGTTTGCTCTCGTTGGACGCTCCAATGTCGGCAAATCCTCGCTCCTCAATTCCCTCGTTCGCCGCAAGAAGCTCGCATTGACCTCCAAGAAACCAGGCAAAACACAATGCATTAACCATTTTCGGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCAGGAGCTTAGAATGGATTGGGAAAAATTCACCAAGGACTATTTTCTTAACCGGTCAACCCTAGTTTCAGTTTTCCTTCTAATAGATGCCAGCATTCCTGCTAAACAAATTGATCTCGAGTATGCTAGTTGGTTGGGCCAGAATCAGATCCCAATGACCATAATCTTCACCAAATGTGACAAGCGGAAGAAGAAAAAGAACGGAGGCAAAAGACCAGAAGAAAATGTTAATGACTTTCAGGAATTGATACACGGCTTCTTCGAGACGGCACCTCCGTGGATCATGACCAGTAGTGTTACTAATCAGGGTCGTGATGAGATTCTTCTCCATATGGCCCAGCTAAGAAACTATTGGCTCAAGCACTAG 948 0.5021 MVLLHLPKLPSTILTPLSSSPIFLRTHFLNPNPNATKTPRPLLLFSTLTLPASEPTPIDPHTPEPTPHLQLPLHKLFVPPETHVPLDTPTLTARILKGSNILLSNYATDSQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPQELRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLEYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVNDFQELIHGFFETAPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2291 315 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 115 303 IPR019987 GO:0005525
Ahy20g2291 315 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 131 311 IPR030393 GO:0005525
Ahy20g2291 315 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 74 312 - -
Ahy20g2291 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 311 IPR027417 -
Ahy20g2291 315 CDD YihA_EngB 134 308 IPR030393 GO:0005525
Ahy20g2291 315 Hamap Probable GTP-binding protein EngB [engB]. 120 309 IPR019987 GO:0005525
Ahy20g2291 315 Pfam 50S ribosome-binding GTPase 135 252 IPR006073 GO:0005525
Ahy20g2291 315 Gene3D - 106 311 IPR027417 -
Ahy20g2291 315 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 74 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2291 Ahy-Chr20 125553035 125556912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2291 K03978 - pvy:116124464 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2291 20 125553035 125556912 Ahy20g2291 20 125553035 125556912 ECH
Ahy20g2291 20 125553035 125556912 Ahy10g1830 10 102146527 102149811 hybridization