Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2286 ATGGCTCCGCCGCCGGCTCACCCTCAGCGATCTCCCTCTCCCTCCCAACCTTCCGGGAAGAGTGAGGTTACTGATCTAAGATCACAACTCCGGCAACTTGCTGGGAGCCGAGCTCCTGGTGCCGATGATGCAAAGAGGGATCTCTTCAAGAAGGTGATATCCAACATGACCATAGGTATTGACGTCTCCTCTCTGTTCGGCGAGATGGTGATGTGCTCGGCTACTTCGGATATTGTTCTAAAAAAGATGTGCTATTTGTATGTTGGGAACTATGCAAAGGTCAATCCTGATCTAGCTCTTTTGACAATTAATTTTCTGCAAAGAGATTGTAAGGATGATGACCCTATGATTCGGGGACTAGCATTGAGGAGTTTGTGTTCGCTTCGGGTGGCAAACTTGGTGGAATATTTGGTTGGGCCATTAGGGTCTGGACTGAAGGATAATAATAGTTATGTAAGGACTGTGGCAGTTATTGGGGTTGTGAAATTGTATCATATATCAGCTTCCACCTGTTTGGATGCAGATTTTCCAGCAACATTGAAGCATTTGATGCTTAATGATCCGGATACTCAGGTAGTCGCGAATTGTTTGTCTGCTCTACAAGAGATTTGGACCTTAGAGTCAACCTCATCAGAGGAAGCAGCCAAGGAAAGAGAAACTCTGGTTAGCAAGCCAGTTATATATTACCTCCTGAATCGCATTAAGGAGTTTAGTGAATGGGCACAATGTCTTGTGCTTGAATTGGTAGCCAAGTATATTCCGTCAGATAACTCTGAAATATTTGATATCATGAATCTCCTTGAAGACAGACTCCAGCATGCAAATGGTGCTGTTGTGTTAGCAACCAGTAAAGTTTTTCTGCACTTGACTTTGTCAATGGCTGATGTCCATCAGCAGGTTTATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTTAGCGCAGGAAGTCCAGAGCAATCCTATGCAGTTTTAAGCCACCTGCATCTGTTGGTCATGCGTGCACCTTATATATTTTCTTCAGACTACAAGCACTTCTATTGCCAGTATAATGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTCACTGCAGTTGCAAATGAAAGTAACACCTATGACATTGTGACGGAATTATGCGAATATGCTGCAAATGTTGACATTCCAATTGCAAGGGAATCAATTCGGGCTGTGGGGAAGATAGCTTTGCAACAATATGATGTTAATGCTATTGTTGATAGGCTTCTACAGTTTCTTGAGATGGAAAAAGACTATGTTACTTGTGAAGCTCTGGTGCTTGTGAAAGATCTGCTAAGAAAATATCCACAATGGAGTCAAGACTGTATTGCTGTTGTTGGGAATATCAGTAGCAAAAATGTTCAAGAGCCTAAGGCTAAGGCAGCTCTTATATGGATGTTGGGCGAATATTCTCAGGACATGCCTGATGCTCCATATGTATTGGAGAGTTTGGTTGAAAATTGGGACGAGGAACATTCTGCCGAGGTTCGCTTACATCTTCTTACTGCAGTTATGAAGTGTTTCTTTAAGAGAGCTCCTGAAACTCAGAAAGCATTAGGGGCAGCTTTAGCTGCAGGTCTTGCTGATTTTCATCAGGACGTTCACGATAGGGCCTTATTTTACTACAGGCTCCTGCAATACAAGGTATCAGTAGCAGAGAGTGTGGTGAACCCCCCCAAGCAAGCAGTTTCAGTGTTTGCTGATTCTCAGAGCAGTGAAATCAAAGATCGCATATTTGATGAATTCAACAGCTTATCCGTTATATATCAAAAGCCTTCGTATATGTTCACTGACAAAGAACACCGAGGGACATTGGAGTTTTCAGATGAACTTGCAAACCTATCAATTAATGCAGAAGCTGGAGATTCTGCTGTTCCAGCTCAGAGAGTGGAGGCAAATGACAATGATCTGCTTCTCAGTATCACGGAAAAAGAGGAAGGTAGAGATGCTGCTAGTAATGGTTCTGCTTATAGTGCTCCTTCCTACGATGGTGCATCTGCTACTTCTGCAGCTTCACAATCACTTGCAGATTTGGCATTTTCGAGTACCAGCGGAAGTGGCCAAGCTCCGGCATCTAGCTTCGCAATTGATGATCTCCTTGGTTTAGATTTTTCGGTTGGGGCTGCGGCCACACCTTCACCTCCTCCGTTGAGTCTCAACCCAAAAGCTGTACTGGATCCAGGCACATTTCAGCAGAAATGGCGTCAACTACCACTATCCTTATCCGAAGATTTTTCCCTGAGTCCTCAAGGAGTTGCAGCTTTGGCAACTTCCAATGCACTTCTCCGGCACATGCAAAGCCATTCAATACACTGCATCGCATCCGGTGGACAGTCTCCTAACTTCAAGTTCTTTTTCTTTGCTCAAAAAGCGGAGTCAGCATCAATATATCTGGTTGAGTTATTGATCAACTCATCATCTGCCAAATCTCAGATTAAAATAAAAGCTGATGACCAAAGTACTTCTCAGGCATTCTCAACTTTATTCCAATCAGCATTGTCCAAATTCGGCACTGCTTGA 2538 0.4354 MAPPPAHPQRSPSPSQPSGKSEVTDLRSQLRQLAGSRAPGADDAKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDDDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVVKLYHISASTCLDADFPATLKHLMLNDPDTQVVANCLSALQEIWTLESTSSEEAAKERETLVSKPVIYYLLNRIKEFSEWAQCLVLELVAKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATSKVFLHLTLSMADVHQQVYERIKAPLLTQVSAGSPEQSYAVLSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYDIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTCEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMPDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRAPETQKALGAALAAGLADFHQDVHDRALFYYRLLQYKVSVAESVVNPPKQAVSVFADSQSSEIKDRIFDEFNSLSVIYQKPSYMFTDKEHRGTLEFSDELANLSINAEAGDSAVPAQRVEANDNDLLLSITEKEEGRDAASNGSAYSAPSYDGASATSAASQSLADLAFSSTSGSGQAPASSFAIDDLLGLDFSVGAAATPSPPPLSLNPKAVLDPGTFQQKWRQLPLSLSEDFSLSPQGVAALATSNALLRHMQSHSIHCIASGGQSPNFKFFFFAQKAESASIYLVELLINSSSAKSQIKIKADDQSTSQAFSTLFQSALSKFGTA* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2286 845 MobiDBLite consensus disorder prediction 650 669 - -
Ahy20g2286 845 Gene3D - 713 843 IPR012295 -
Ahy20g2286 845 Pfam Adaptin N terminal region 38 552 IPR002553 GO:0006886|GO:0016192|GO:0030117
Ahy20g2286 845 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 17 843 IPR026739 GO:0016192
Ahy20g2286 845 MobiDBLite consensus disorder prediction 1 26 - -
Ahy20g2286 845 Gene3D - 15 610 IPR011989 -
Ahy20g2286 845 PIRSF Beta_adaptin 11 845 IPR016342 GO:0015031|GO:0030276
Ahy20g2286 845 SUPERFAMILY ARM repeat 29 599 IPR016024 -
Ahy20g2286 845 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 17 843 - -
Ahy20g2286 845 SMART B2_adapt_app_C_2 723 840 IPR015151 GO:0006886|GO:0016192|GO:0030131
Ahy20g2286 845 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 731 840 IPR009028 GO:0006886|GO:0016192|GO:0030117
Ahy20g2286 845 Pfam Beta2-adaptin appendage, C-terminal sub-domain 726 839 IPR015151 GO:0006886|GO:0016192|GO:0030131
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2286 Ahy-Chr20 125290909 125298249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2286 - - gmx:100801153 1494.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2286 20 125290909 125298249 Ahy20g2286 20 125290909 125298249 ECH
Ahy20g2286 20 125290909 125298249 Ahy10g1825 10 101946811 101954532 hybridization