Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2283 ATGCTTAGGTTGTGGAAATGGTACCAAAATTGCTTGGCTGTTCACCCTGTTAAGACACAGGTAATCAGTTCAGGAATCATATGGGGTGTTGGTGACATTGCTGCACAAGCTGTCACTCATAGTTATTCTACACCTAACACTGCCCACACTCATCAAATTCAGGATGACGACGACGACGAATTCAAGATCAACTGGAAGCGGGTGGCTACAACCAGCTTGTTTGGGTTAAGCTTTGTTGGCCCAGTTGGCCATTACTGGTATGAAGGCTTGGATAGATATATAAGATTGAGACTCATGCTCAAACCAGATTCCTTCCGCTTTGTTGCCTCTAAAGTTGCCATTGACGGGTTCCTTTTCGGGCCATTGGATTTACTCGCATTTTTCACTTACATGGGCCTTTCTACCGGAAAGAGTATTCCTCAAATCAAAGAAGATGTGAAGAGAGATTTTCTTCCCGCCTTTATCTTAGAAGGAGGGATATGGCCCATCGTTCAGGTCGCAAATTTTCGGTATGTACCCGTAAGGTATCAGCTCCTATATGTCAACCTCTTCTGCTTGCTGGATAGCTGTTTCTTGTCTTGGATTGAGCAACAACAGGATGCTCAATGGAAAAAATGGGTGAAATCTTTTCTACCTCTCAAGTAA 645 0.4372 MLRLWKWYQNCLAVHPVKTQVISSGIIWGVGDIAAQAVTHSYSTPNTAHTHQIQDDDDDEFKINWKRVATTSLFGLSFVGPVGHYWYEGLDRYIRLRLMLKPDSFRFVASKVAIDGFLFGPLDLLAFFTYMGLSTGKSIPQIKEDVKRDFLPAFILEGGIWPIVQVANFRYVPVRYQLLYVNLFCLLDSCFLSWIEQQQDAQWKKWVKSFLPLK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2283 214 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 213 IPR007248 GO:0016021
Ahy20g2283 214 Pfam Mpv17 / PMP22 family 133 193 IPR007248 GO:0016021
Ahy20g2283 214 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2283 Ahy-Chr20 125261903 125264700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2283 8 193 Miscellaneous Gene Families AT4G04470 25.668 9.46e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2283 K13348 - gmx:100805283 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2283 20 125261903 125264700 Ahy20g2283 20 125261903 125264700 ECH