Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2278 ATGGTTTTCTACTTCAAGGCACGCCCTGAAGCTGGCGATTACACCATCTTCATGGGTCTCGACAAGTACGAGAACGAAGAACTCATCAAATATGGTTTCCCTGAAGATATCTGGTTCCATGTTGATAAGATGTCTTCAGCACATGTTTATGTAAGACTGCACAAAGGTCAGACTATTGATGACATTAGTGAAGGTTTACTGGAGGACTGTGCTCAGCTTGTTAAAGCAAATTCGATTCAAGGAAATAAGGTGAACAATATTGATGTTGTTTATACTCCCTGGGCCAATTTAAAGAAAACTGCTTCAATGGATGTTGGTCAAGTTGGTTTCCACAACCCCAAAATGGTCCGAACTGTGAGAGTGGAGAAGCGGATCAATGAGATTGTCAACAGGCTAAACAAAACAAAAGTGGAAAGGAAACCTGATTTGAGAGCTGAGCGTGAAGCAGTTAATGCAGCTGAAAGAGCTGAGAGAAAGCAACAAATGAGAGACAAGAAACGCCGTGAGGAATTGGAAAGACTTGAAAAGGAGAGACAAGCCGAGCTGAGGAGCTACAAGGGTTTGATGGTTGCAGAGAATATGACATCCAATAAGCACATTGCATCAGGAAGCAAAACACTGCAAGAAATGGAGGATGATTTCATGTAA 648 0.4198 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVRVEKRINEIVNRLNKTKVERKPDLRAEREAVNAAERAERKQQMRDKKRREELERLEKERQAELRSYKGLMVAENMTSNKHIASGSKTLQEMEDDFM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2278 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Ahy20g2278 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Ahy20g2278 215 MobiDBLite consensus disorder prediction 140 177 - -
Ahy20g2278 215 Coils Coil 149 179 - -
Ahy20g2278 215 PANTHER OS01G0750500 PROTEIN 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2278 Ahy-Chr20 125018147 125021141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2278 - - gmx:100802228 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2278 20 125018147 125021141 Ahy20g2278 20 125018147 125021141 ECH
Ahy20g2278 20 125018147 125021141 Ahy10g1818 10 101721871 101724861 hybridization