Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2271 ATGGCAGCCATCGACTACGAAGACGCACGCGGCGGCTCCTACGACGACCGCCGCCAAACACCACCACAGCAGGACCTCGGCTACGACCCAAACTTCGTCCCCGACTCCGTCAAATCCTTCGTGGTCCACCTCTACCGTCACATCCGCGAGAAGAATGTCTACGAGATACACCAGATGTATGAGACCTCCTTCCACACTCTCTCCGACCGTCTCTTCAAGGACTCGCCCTGGCCCTCCGTCGATGCCGTCGCTCATTACGTCGACAACGACCACGTCTTCTGCCTCCTCTACCGTGAGATGTGGTTCCGCCACCTGTACGCTCGCTTAACCCCTACACTCCGCCAGAGGATCGATTCATGGGACAATTACTGCAGCTTGTTCCAGGTGGTGCTTCATGGTGTTGTCAACATGCAGCTTCCGAATCAGTGGCTATGGGATATGGTTGATGAGTTCGTTTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCCAAGATGAAGAACAAGACGGAGCAGGAGATCGCTCTCTTGCGCCAGTTCGATCAGGCTTGGAATGTTTATGGGGTTCTTAACTTCTTGCAAGCGCTTGTGGAGAAGTCCATGATTATTCAGATACTTGAGCAGGAGAAGGAGGGGCTGGAGCAGTTCACTGCTACTGATGGTTATGACTACAATGGAGGAAGTAACGTGTTGAAGGTGTTGGGATATTTCAGCATGGTTGGGTTGCTGCGTGTGCACTGTCTTCTCGGTGATTATCATACGGGGCTCAAGTGCTTGCAACCTATTGACATTAGTCAACAGGGTGTTTACACAAGCGTGATTGGAAGCCACATCACAACCATATATCACTATGGTTTTGCTAATCTCATGCTCCGCAGATACGTGGAAGCAATTCGTGAATTTAACAAGATTCTCTTGTATATCTTTAAGACAAAGCAATACCATCAGAAGTCACCACAGTATGAGCAGATATTGAAGAAAAATGAACAAATGTATGCCTTGCTGGCTATTTGCCTTTCACTCTGCCCACAAAACAGGCTTGTTGATGAAACTGTGAACTCTCAATTGCGAGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGATGATGAGGCATTTGCTATATATGACGAGCTCTTCTCCTATGCATGTCCCAAATTCATCACTCCTTCAGCACCTAGTTTTGAGGAGCCTCTTGTAAATTACAACCAGGATGCCTATAGGCTACAATTGAAACTGTTCCTTTATGAAGCCAAGCAACAACAGTTGCTATCCGGTGTCCGTACCTTCTTGAAGGTGTACTCAACAATCTCACTTGCAAAACTTGCAAGTTACATGGAAGTTGATGAACCCACCTTAAGGACTATCTTGATGACATACAAGCACAAGACACATTCAGTGGATAGTGATGGAAAAGTCATATCGAATGCTGATGTGGATTTCTACATAGATGATGACATGATTCGTGTTATGGAGTCTAAGCCTGCCAAGCGATATGGGGATTACTTTTTGCGGCAGATTGCCAAGCTTGAAGGGGTAATCAATGAGATGGACAGTGTAAAACTGGAGTGA 1575 0.4692 MAAIDYEDARGGSYDDRRQTPPQQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFHTLSDRLFKDSPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQNRLVDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHSVDSDGKVISNADVDFYIDDDMIRVMESKPAKRYGDYFLRQIAKLEGVINEMDSVKLE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2271 524 Pfam RNA polymerase I-associated factor PAF67 115 510 IPR019382 GO:0003743|GO:0005737|GO:0005852
Ahy20g2271 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 28 523 IPR019382 GO:0003743|GO:0005737|GO:0005852
Ahy20g2271 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 28 523 - -
Ahy20g2271 524 MobiDBLite consensus disorder prediction 1 31 - -
Ahy20g2271 524 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 14 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
Ahy20g2271 524 ProSiteProfiles PCI domain profile. 299 498 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2271 Ahy-Chr20 124857348 124861277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2271 K15029 - gmx:100786533 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2271 20 124857348 124861277 Ahy10g1808 10 101289549 101293489 hybridization