Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2238 ATGGCATCCACCTTCTTCAACAACCTTCTCGCAACACCCAAAGGCCAAAGCACGTCCTATCCTATGCACTGCAACAACCCATGCAACCTGCCACCTACTCCCCAACTCCTCCCAACCGCCAACTTCGGACCCCTCACAGCGGGACTGCTCACAAGTTCTTTGAGGGATGTACTTCAAGGTCTCCATTCCCGAACGGCGCCAGAGCTTCTATTTTATTTACTCTGTCGAGAGCCCTTCGAGGTGACACAGTACGGACCTAGGTTCACCGGCGTCAGCGCGCAGATTCTTGGTGCTGATGACAAGTACATTTGCCAGTTCTCAGAGGAATCGCAAAACTTCTGGGGAGATGGTCATGAACTGATTCTGGGAAACACCTCTGTGGCCAAGAATGATTTGAGACCTCCAAACAAGGAGCTTCCCCCTCAGGAATTTGATAATAAAATGATGGAAGGTTTTCAAGTTACCCCGCTTTGGCATCAAGGTTTCATTTGTGATGATGGAAGGTCAAATTAA 513 0.4932 MASTFFNNLLATPKGQSTSYPMHCNNPCNLPPTPQLLPTANFGPLTAGLLTSSLRDVLQGLHSRTAPELLFYLLCREPFEVTQYGPRFTGVSAQILGADDKYICQFSEESQNFWGDGHELILGNTSVAKNDLRPPNKELPPQEFDNKMMEGFQVTPLWHQGFICDDGRSN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2238 170 Pfam Tocopherol cyclase 83 168 IPR025893 GO:0009976
Ahy20g2238 170 PANTHER - 78 169 IPR025893 GO:0009976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2238 Ahy-Chr20 123948457 123951639 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2238 K09834 - aip:107624241 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2238 20 123948457 123951639 Ahy20g2238 20 123948457 123951639 ECH