Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2235 ATGATGTTTATCGCTACTTTTGGTACACTATTCATACTGATGGGAAGCTTCCCAGAGATAGAGCATGTGGTGGAAGTTCCACTTCTCTCCAAGGCCACTTCCACTACTTCCCACAACCACAAGGGTGGCTTCAGAACCTTGCCTTTCATCATAGCAAATGAGGCATTTGAGAGGCTGGCTAGCATTGGACTAATGCCTAACATGATATTGTACTTGACAAGAGAGTATGGGATGGAAACTGCTGCTGCCACCAATTTCCTCTTGTTATGGTCTGCTGCCACCAATTTCACACCCCTCATTGCTGCTTTACTTGCAGACTCTTGTGTCGGTCGATATTCCATGATTGCTTATGGTTCTGTTACTAGCCTGTTGGGAATGGTTCTTCTATGGTCAACAACCATGATTCCAAGGCAAATTTCTAACCAATTAACCAATGTCTATAACTCCACTTCAACAATGCAACTTTTGATCTTACATTCCTCTTTTGCCCTTATGGCCATTGGAGCTGGAGGCATAAGATCATCCTCTTTAGCCTTCGGTGTTGATCAGTTAAGCATGAAGGACAAAGATGGGAATGTTAAGGAAAGTTACTTCGGATGGTACTATGCTTCGGTCACATTGTCGATACTTCTTGGTCTAACTGGTGTTGTTTACATTCAAGAAACCATGGGATGGAAAGTGGGGTTCGGAATTCCTGTTATCTTAATGTTCATATCGACTATATCGTTTTTCTTAGCTTCTCCATTTTATGTCAAGCTAGAGACCAAAAAGAACATGGTGAGTGGGTTAGCTCAGGTCATTGTAGCCTCTTATAGAAATAGACTTGTTCAGTTGAATCAGGAATATGGAAATTTGACATACTACCACGAGAAGGATTCGATTCTCCTAGTGCCAAGTGAAAGTTTGAGGTTTCTCAACAAAGCATGCATGATTAGAGATCCCTCACAAGATCTCAAACCAGATGGAAGGCCTTTGAATCCATGGAATCTTTGCACAGTGGATCAAGTGGAAGAACTAAAGGCACTTCTCAGGGTAATTCCAATTTGGACAGCAGGAATCATGCTCACTGTGAATGTTAGCCAAGGTTCTTTCCTGGTGCTCGAGGCATCGTCCATGGACCGCCACATCACTTCAAACTTTGAAATTCCTTCAGGCTCCTTTGGAACATTCATGATTATATCGGTAGTACTTTGGGTTATACTCTATGACCGTGTTTTAGTCCCGGCTGCATCGTTGATACTGGGACGGCCGGCATGCTTAGGATCAAAACAGAAAATAGGACTTGGCCTATTTTCATCTTGTGTTTCAATCGCATCATTAGCAATAGTAGAGAACATTAGGCGTGGGATTGCAATCGATCAAGGCTATTCGGAACAACCACAAGCCGTGGTGAACTTGTCCGCCCTATGGCTCCTGCCACGGCAAATCCTTGACGGATTGGCCGAGGCATCAGCCTGCATTGGACAAAACGAGTTCTTTCTGGCCGAGCTTCCCCAATCGATGTCTAGCTTGGCGTCCACGCTAGGTGGCCTGGGAATGTCTCTGGGGAATTTGGCAGCAAGTTTTGTTCTGAGTGGTGTTGATGGTGTTACTGGAGGAGGAGGAAATGAGAGTTGGCTTTCAAGCAACATAAACAAGGGTCATTATGATTACTATTATGCATTCATTTTTAGTTTGTGCTTTGCAAATTTTGTATATTTTATTTACTGTAGTAAAGCTTATGGCCCTTGTAAGGGTAATGGAAAGTATAATTTTAAGTAG 1761 0.431 MMFIATFGTLFILMGSFPEIEHVVEVPLLSKATSTTSHNHKGGFRTLPFIIANEAFERLASIGLMPNMILYLTREYGMETAAATNFLLLWSAATNFTPLIAALLADSCVGRYSMIAYGSVTSLLGMVLLWSTTMIPRQISNQLTNVYNSTSTMQLLILHSSFALMAIGAGGIRSSSLAFGVDQLSMKDKDGNVKESYFGWYYASVTLSILLGLTGVVYIQETMGWKVGFGIPVILMFISTISFFLASPFYVKLETKKNMVSGLAQVIVASYRNRLVQLNQEYGNLTYYHEKDSILLVPSESLRFLNKACMIRDPSQDLKPDGRPLNPWNLCTVDQVEELKALLRVIPIWTAGIMLTVNVSQGSFLVLEASSMDRHITSNFEIPSGSFGTFMIISVVLWVILYDRVLVPAASLILGRPACLGSKQKIGLGLFSSCVSIASLAIVENIRRGIAIDQGYSEQPQAVVNLSALWLLPRQILDGLAEASACIGQNEFFLAELPQSMSSLASTLGGLGMSLGNLAASFVLSGVDGVTGGGGNESWLSSNINKGHYDYYYAFIFSLCFANFVYFIYCSKAYGPCKGNGKYNFK* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2235 586 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 40 575 - -
Ahy20g2235 586 Pfam POT family 113 539 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy20g2235 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 40 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy20g2235 586 SUPERFAMILY MFS general substrate transporter 40 569 IPR036259 -
Ahy20g2235 586 Gene3D MFS general substrate transporter like domains 23 579 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2235 Ahy-Chr20 123885055 123897932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2235 41 584 Organic Solute Cotransporters AT1G52190 51.971 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2235 K14638 - gmx:100809846 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2235 20 123885055 123897932 Ahy10g1788 10 100673961 100684348 hybridization