Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2233 ATGAGCTCTACAAATTCCAAATGCTCAATTCATCAGCTAGAGAACATAGATGAGAATGCAGCTTCAGAATGCACACTATCATCATCATGTCCACCACCTGAGACTCCAACAGAGTCTATGGAGTTTCTTGCAAGATCATGGAGTCTCTCAGCAATGGAACTCTCCAAAGCACTTCACTATAACACTAACATCAAGCCTTCCACAACTTCTGCTGAGAACAAGGATTCTGACTTATTTTTACTCCATCAAGCAATCAATCCAGAATTCCTTTCAAGTCAAAACTTGCTCAGAAATGGGCTTTACAAGAGTTTGCTGAGAGGAAGGACAATGGGAAGATGGCTGAAGGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCAGTTGCATGCTGCAGTATCCGTGGCAGGTGTAGCTGCTGCCGTTGCGGCCATTGCAGCTTCAATGGCATCATCACAAGAAGTGCCTAATGCCGGCCAAAAGAACAATCCCATCAGTTCTGCCACGATTGCATCAGCAGCAGCCTTGGTTGCCTCTCACTGCATTGAGATTGCTGAGGATATGGGAGCTGAACATGAACAAATCTTAACTGTAGTTAACTCTGCCATTAATGCAAAAACCAATGGAGATATGATGACTTTAACAGCTGGAGCGGCCACAGCGTTGCGAGGAGCTGCTACTCTAAAGGCAAGACTGCAGAAGGGGGTTGGAGCGACGACGTTCCCTCTAGTCGATGAAAAATGCAAGGAAGGAAGAGAAGCAAACATCTTGCTGGCACTGGACTCTGTTTTCAAAGGAGGGGAGATTCTAAAGCGTACAAGAAAAGGAGATCTTCACTGGAAGCAAGTATCTTTCAATATGAATTCAAATTTACAGGTTATAGCGAAAATGAAGAGCAAGCACATGGCAGGAACATTCACCAAAAAGAAGAAATGTATAGTCACCGGAGTCTGCAGTGATGTCCAAGCTTGGCCGGGAAGAGAGAAGGAAGACTTAATAGAAAAGAGGGCATATTTTGGAATTAAAACTGCAGAAAGGATAATAGAGTTTGAATGTGAGAGTAAAAGAGACAAACAGTTCTGGCTTGATGGGATCCAGTATATGTTGAATTGCCGCGCCAAAGCGGCATAA 1140 0.4377 MSSTNSKCSIHQLENIDENAASECTLSSSCPPPETPTESMEFLARSWSLSAMELSKALHYNTNIKPSTTSAENKDSDLFLLHQAINPEFLSSQNLLRNGLYKSLLRGRTMGRWLKDQKERKKQEIRTHNAQLHAAVSVAGVAAAVAAIAASMASSQEVPNAGQKNNPISSATIASAAALVASHCIEIAEDMGAEHEQILTVVNSAINAKTNGDMMTLTAGAATALRGAATLKARLQKGVGATTFPLVDEKCKEGREANILLALDSVFKGGEILKRTRKGDLHWKQVSFNMNSNLQVIAKMKSKHMAGTFTKKKKCIVTGVCSDVQAWPGREKEDLIEKRAYFGIKTAERIIEFECESKRDKQFWLDGIQYMLNCRAKAA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2233 379 Pfam Auxin canalisation 66 243 IPR008546 -
Ahy20g2233 379 Pfam Auxin canalisation 33 65 IPR008546 -
Ahy20g2233 379 PANTHER EXPRESSED PROTEIN 7 377 IPR040269 -
Ahy20g2233 379 SUPERFAMILY PH domain-like 266 373 - -
Ahy20g2233 379 Pfam Plant pleckstrin homology-like region 271 375 IPR013666 -
Ahy20g2233 379 Gene3D - 259 370 IPR011993 -
Ahy20g2233 379 ProSiteProfiles PH domain profile. 265 373 IPR001849 -
Ahy20g2233 379 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 7 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2233 Ahy-Chr20 123841567 123844839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2233 - - gmx:100814154 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2233 20 123841567 123844839 Ahy20g2233 20 123841567 123844839 ECH
Ahy20g2233 20 123841567 123844839 Ahy10g1786 10 100617205 100620212 hybridization