Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2214 ATGATTGGTTTGCCGGAATTCCCAAAAATTGTGGCAACTTCTGCTGTTAGATTGGTTGATGCTTTTGTGGATTCATTCTTTGAATTCATTGATCAGCCATTGCTTCCATCTCAGAATAACTTTGCTCCCGTGGAGGAGTTGGGAGAAACAATGGTTGTGACTAACAACATCGATGGCCATATTCCGAATGGTTTTCCTGAGGGTGTCTACATCAGAAATGGACCAAATCCGCTATTTGGAGGACTGAAATCAACAAATTCAATATTTGGAAAGACAAGTCACGTATGGGTGGAAGGAGAGGGAATGCTTCATGCATTGTATTTCAATTATAATAATAATAATAATAACAATAATTGGACGGTTCTATACAACAACAGGCACGTTGAAACTGAGACCTACAAGCTTGAAAAACAAAGGAACAAACCATCATTTTTGCCGGCCATTCAAGGCGATTCACTTGCCATTTTGTTTGCATACCTCTTAAATTTGTTGAGATTTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTTTATTCCGTGGCTGAAAGTCACATCCCACAAGAGATTGACATCTTTACCCTCAAAACCTTAAGGAATTGGGATGTCAATGGAGCCTGGAATAGACCCTTTTGCAGCCACCCAAAGAAAGCTCCAGGTACAGGGGAGCTTGTAACATTAGGAATATCTCCAATTTTACCTTTTTGTGAACTTGGAATAATTTCTGCCGATGGAAAAAAATTGGATCACAAAGTTGATCTCAAACTGAACAGGTGCACCCTTTGCCATGAACTAGGTGTTACACAGAGGTACAATGTAATCATGGATTTTCCACTAACCATTGATCTACTCAGACTTGTTAAAGGAGAGCAACTAATAAGGTATGATAAGGATGAATATGCAAGAATTGGTGTGATGCCACGCTATGGTGATGCAAGCTCAATCAAGTGGTTTGAAGTGGAGCCTAATTGCACCTTCCATATCATCAATTCTTTTGAGGAGGGTCACGAGGTTGTAGTAAGAGGCTGCAGATCTCTTGATTCATTGATTCCTGGACCTCATCCGAGTTCGAGTTCGAATGAACTCGATTGTCTGTCTCGTTGTTACGAATGGCGATTGAACATGGAAACAGGGGAAGTTAAGGAGAGAAGTCTGATCGGACCCAAAGTAGTGTATATGGATTTTCCTATGGTCAATGAAAACTTCATGGGTATCAAGAATAGATATGCATACACACAAGTAGTTGATCCCCTTGCAAGCTCTACACAAGATGTGCCAAAATATGGAGGTCTAGCAAAGCTCTACTTCGAAGAATCATCGAACAAACAACATGATGAAGATCCAATAAGGGTTGAATACCATATGTTTGAGAAGAACACATTTTGCAGTGGAGCTGCTTTTGTACCGAAAGATGGTGGTGTAGAAGAAGATGATGGTTGGATTATCAGTTTTGTTCATAACGAAGATGATGCCATATCTCAAGTTCATATAATTGATGGAAAGAAGTTAAGTGGTGAGGCAGTTGCCAAGATTACATTGCCATGCAGAATTCCTTACGGTTTCCATGGAGCTTTCATGCCAATCTCTTTTCAGGCGTCTCACTAG 1626 0.4016 MIGLPEFPKIVATSAVRLVDAFVDSFFEFIDQPLLPSQNNFAPVEELGETMVVTNNIDGHIPNGFPEGVYIRNGPNPLFGGLKSTNSIFGKTSHVWVEGEGMLHALYFNYNNNNNNNNWTVLYNNRHVETETYKLEKQRNKPSFLPAIQGDSLAILFAYLLNLLRFGKVNKYISNTNVFEHSGKFYSVAESHIPQEIDIFTLKTLRNWDVNGAWNRPFCSHPKKAPGTGELVTLGISPILPFCELGIISADGKKLDHKVDLKLNRCTLCHELGVTQRYNVIMDFPLTIDLLRLVKGEQLIRYDKDEYARIGVMPRYGDASSIKWFEVEPNCTFHIINSFEEGHEVVVRGCRSLDSLIPGPHPSSSSNELDCLSRCYEWRLNMETGEVKERSLIGPKVVYMDFPMVNENFMGIKNRYAYTQVVDPLASSTQDVPKYGGLAKLYFEESSNKQHDEDPIRVEYHMFEKNTFCSGAAFVPKDGGVEEDDGWIISFVHNEDDAISQVHIIDGKKLSGEAVAKITLPCRIPYGFHGAFMPISFQASH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2214 541 Pfam Retinal pigment epithelial membrane protein 42 534 IPR004294 GO:0016702
Ahy20g2214 541 PANTHER BETA-CAROTENE DIOXYGENASE 7 535 IPR004294 GO:0016702
Ahy20g2214 541 PANTHER OS06G0162550 PROTEIN 7 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2214 Ahy-Chr20 123097338 123106827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2214 - - ahf:112717820 1077.77