Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2187 ATGAGTGGTTGCAAGAGTTTGCTGTTTCCGCTATGCTATATTAATTCCTTCAGCACCCACATTTCAATAAGATTCCATCCCAACTCTCTCTCAGCTATTAATTCCTTCAGCACCCACATTTCAAAAGATTCCATCCCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATTACACCATTGAAGATATGGCAGAAGAGTCAAAGGCATCAAAATGGGAAGGCAAATCTATTGTTGAGCTTCAAAGCACAAGTGCAAATCAAACATGGCCTTTACTAGAGGATTTCTTCAACCTACACAACTTGATCCCAATAGACACTTGCTACCAAGTTGAGAGTGTTGAAGGCCACCCTGGCCCCACACGCTATTGTGCTTCCGCTCCTAAAGATGATCATGTGTTGTGGGTCAAAGAGAGGCTGCTTGCCGTTGACCAAGGTCAACGATGTTTGTCCTATGATGTTGTTGATGGCAACTTGGGCTTCAAGAACTATGTGGGCACAATCAAGGTTGTGCCTTCATCATTGGAAGGTTGCAAGATCGAGTGGAGCTTTGTGTGTGATCCAATGGAATCTTGGAGTTTCAAAGATCTCAATTCTTACATAGATTCCACTCTTCAGTTCATGGCCAAGAAGATTGAGCTTGCATGCTCCAAGGCAAGCGTCTGA 750 0.4467 MSGCKSLLFPLCYINSFSTHISIRFHPNSLSAINSFSTHISKDSIPTLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSHYTIEDMAEESKASKWEGKSIVELQSTSANQTWPLLEDFFNLHNLIPIDTCYQVESVEGHPGPTRYCASAPKDDHVLWVKERLLAVDQGQRCLSYDVVDGNLGFKNYVGTIKVVPSSLEGCKIEWSFVCDPMESWSFKDLNSYIDSTLQFMAKKIELACSKASV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2187 249 PANTHER LACHRYMATORY-FACTOR SYNTHASE 92 246 - -
Ahy20g2187 249 CDD PYR_PYL_RCAR_like 113 241 - -
Ahy20g2187 249 PANTHER OS05G0202300 PROTEIN 92 246 - -
Ahy20g2187 249 SUPERFAMILY Bet v1-like 112 242 - -
Ahy20g2187 249 Pfam Polyketide cyclase / dehydrase and lipid transport 112 235 IPR019587 -
Ahy20g2187 249 Gene3D - 94 248 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2187 Ahy-Chr20 121262935 121263814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2187 - - ahf:112784902 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2187 20 121262935 121263814 Ahy20g2187 20 121262935 121263814 ECH
Ahy20g2187 20 121262935 121263814 Ahy10g1741 10 98696994 98697735 hybridization