Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2185 ATGAAACCACACAAATCCACATCGACACCACAATTCCCTAATAACGTGGCTGATATCACGTGCATGGACCAACCAATTGTGGCGGAGAAGGCTTGCAAAACGGTGCGTTTAATAGGCTTCCTTATCCAAAACGGAGTCTCCAAGAGTAACATCAACATGCAAGATTTTATGAGAAGGGGGAAGAGTATAGGGAAGTCGCTAAACAACGCCGTGGCGCGTCACCATGAAGCACTCACATGTCGTGGTGACGCGGCCACGGAGTTTGTTTCTCCTTTGGATTACCAGTTCAGCTGCAGCGGTAGCCCGCCGCGGCCGTCTTATTATGCGGCCAGGCGAAGGCTCTCCCCGATCGCTACGGTACATGGAGGGAGGCATTCCCCGCAGGCTCATAAGTTTGCGAGGATGTGTCGCGGCGGCGGGGAGAGCGATGCGCTGGTGAGGCATTACTATCCGGTGAGGAGGCGCGTGAAGATTGCAGCTGCGGGATCGCCGTCCGCGGCTTCTTCTTTGGCAGTGGAGGAGGAGAAGGAGGAGTTCCGGGTGGATGAGGCGGCGGAGGAGTTCATCGAGAGGTTTTATAGGGATCTAAGGTTGCAGAAATGGTTGGATCATTGTTGCTAG 621 0.5443 MKPHKSTSTPQFPNNVADITCMDQPIVAEKACKTVRLIGFLIQNGVSKSNINMQDFMRRGKSIGKSLNNAVARHHEALTCRGDAATEFVSPLDYQFSCSGSPPRPSYYAARRRLSPIATVHGGRHSPQAHKFARMCRGGGESDALVRHYYPVRRRVKIAAAGSPSAASSLAVEEEKEEFRVDEAAEEFIERFYRDLRLQKWLDHCC* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2185 206 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 24 204 - -
Ahy20g2185 206 Pfam Cotton fibre expressed protein 181 200 IPR008480 -
Ahy20g2185 206 PANTHER DUF761 DOMAIN PROTEIN 24 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2185 Ahy-Chr20 121248505 121249724 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2185 - - lang:109327860 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2185 20 121248505 121249724 Ahy10g1739 10 98680407 98681568 hybridization