Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2167 ATGTCGAGTGATGATGCCGTGAAACCCGTACCCTACGCTCGCCGGCGCCCCACCGGAGAAGGTAGCAGCAGCTCCGGTTCCTCTCACCGCAAGCGGGCCAAATTTCTCCATAATTTCAATGACGTGGGGGAGGATGGATTTGATTCTAGCTGTGAGGTAGAGGGCGAAGGTGAATGTGATGAATCTGACGTAGCAAAAGTAGAAGATCAAGGGGTCAAAATGGATCTCACTGAGGATTTATTGCATATGGTTTTCTCATTTTTGGATCCTCCCAATCTATGCAAAGCTGCCAGGGTTTGTACGCAGTGGAGAACTGCTAGTGCTCATGAAGATTTCTGGAGGACTTTGAACTTCAAAGATCGTTACATTTCTCTGGAAGAATTTGAGGACATGTGTAGGCGTTATCCTAGAGCCACAGCAGTGAGCATATCCGGTGCCACAATTTCCTCGCTTGTCATGAAGGCTATCTCTTCCCTGAGGAATCTTGAGGTTCTAACACTGGGAAAAGGACATATACCGGATGGTTTCTTCCATGCCTTGGAAGATTGCTCTATGTTGAAAAGACTGAGCATCAATGATGCTACACTTGGCAGCGGTATTCAGGAGATATCTATTACTCACTATAGGATGTGCCATCTTCAAATAACAAAATGCCGTGTGATGCGTATAGCAGTCAGATGTCCACAGCTTGAAACCATGTCGTTGAAACGCAGTAATGTTGCACAGGCTGTGCTTAATTGCCCTCTTTTGCATGAACTTGACATAGGCTCTTGCCATAAACTTCCTGATTCTGCAATTCGCTCAGCTGCAACATCATGCCCCCAATTAGTTTCTTTGGATGTGTCTAATTGCTCATGTGTTAGTGATGAGACACTACGTGAAGTATCCTTCTCTTGTGCTAACCTTAGTTTCCTTGATGCCTCATACTGCCCAAATGTATCTCTTGAGTCTGTTAGACTTCCAATGTTGACAGTTCTTAAGCTTCACAGTTGTGAAGGCATCACCTCCTCTTCAATGGCTGCAATAGCTCATAGTAGTTTGTTGGAGGTTTTGGAGCTTGATAATTGTAGTCTACTGACTTCAGTATCTTTAGATCTTCCACTTTTGCGAAATATAAGATTGGTACACTGTCGCAAATTAGCTGATTTGGACTTGAGGACTATAATGCTTTCTTCTATGAAATTAGCCATACCAAAGCAGGACAGCTTAACCACATTGGCTTTACAATGCCAATCCTTGCAAGAAGTAGATCTGTCTGAGTGCGAATCGTTGACAAACTCTGTATGTGATGTTTTCAGTAATGGAGGAGGATGCCCAATGTTGAAATTATTAACTCTTGATAATTGTGAGAATTTGACATCAATTCGATTTATCAGCACCTCTCTGGTCAGTCTCTCCCTTGGTGGTTGTCGAGCAATAACTAATCTTGAGTTATCTTGCCCAAAGCTTGAGAAAGTCATTTTGGATGGTTGTAATCATTTGGAAAGAGCATCATTCTGTCCTGTTGGTCTCCTGTCTCTTAATTTAGGAATATGTCCGAAACTGAACATACTCAGCATTGAAGCACCATTTATGGTTTCTCTCGAGTTGAAAGGATGTGGAGTACTGTCGGAAGTATTCATCAATTGTCCGCTCTTAACTTCTCTGGATGCTTCCTTTTGCAGCGAACTAACAGATGATTGCTTATCTGCCACCACTGCCTCATGCCCGTTAATTGAATCGTTAATATTAATGTCATGCCGATTGATTGGTTCGAAGGGACTTGATTCTCTGTGTTCACTTCCAAATTTGACGGTTCTTGACTTATCATACACTTTCTTGGTGGACTTGCAGCCTGTTTTTGAGTTTTGTTCACAACTAGAGGTGCTAAAGTTGCAAGCATGCAAATCTCTTTCCGACACTTCACTGGAACCTCTTTACAAAGGAGGTGCTTTACCTGCACTACAGGAGTTGGACTTGTCCCATGGAACTCTCTGTCAGTCTGCCATAGATGAACTTCTTGTTTGCTGCACAAATCTCAGGCGTGTGAGCCTGAATGGCTGTGAGAATGTGCATGATTTGAAGTGGGGATGCAGTCATGGGCAGGTTGATGTGTCGCCTGCTCTGAAGATCCCATATGGTGTAAGTTCCCATGAGAATGTGTTGGAGTCAAGTCAGGAATCCACCTGCTTACTTCAGAACCTCAACTGTGTGGGATGTACAAATATTATAAAGGTTGAGATTCCATCAAGGGCACATTGTTTAAATCTATTATTCTTAAACCTTTCGCTATCAAGGAATTTGAAGGAGGTCAATATTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAACTGTTCTTCGTTGGAAATTCTAAGGCTAGATTGTCCAAGATTGATCAGCCTATTTCTTCAGTCTTGCAGTATTGATGGGGAAGCTGTTGAAGCTGCCATATCAAAATGCAATATGCTGGAGACTCTTGATGTTCGCTTTTGTCAAAAGATAAGCTCAACAAGTGTCGCGAGATTCCGTACATCATGTTCTAGTTTGAAGCGGATATTCAGCAACTTGTCAAATTAA 2559 0.4252 MSSDDAVKPVPYARRRPTGEGSSSSGSSHRKRAKFLHNFNDVGEDGFDSSCEVEGEGECDESDVAKVEDQGVKMDLTEDLLHMVFSFLDPPNLCKAARVCTQWRTASAHEDFWRTLNFKDRYISLEEFEDMCRRYPRATAVSISGATISSLVMKAISSLRNLEVLTLGKGHIPDGFFHALEDCSMLKRLSINDATLGSGIQEISITHYRMCHLQITKCRVMRIAVRCPQLETMSLKRSNVAQAVLNCPLLHELDIGSCHKLPDSAIRSAATSCPQLVSLDVSNCSCVSDETLREVSFSCANLSFLDASYCPNVSLESVRLPMLTVLKLHSCEGITSSSMAAIAHSSLLEVLELDNCSLLTSVSLDLPLLRNIRLVHCRKLADLDLRTIMLSSMKLAIPKQDSLTTLALQCQSLQEVDLSECESLTNSVCDVFSNGGGCPMLKLLTLDNCENLTSIRFISTSLVSLSLGGCRAITNLELSCPKLEKVILDGCNHLERASFCPVGLLSLNLGICPKLNILSIEAPFMVSLELKGCGVLSEVFINCPLLTSLDASFCSELTDDCLSATTASCPLIESLILMSCRLIGSKGLDSLCSLPNLTVLDLSYTFLVDLQPVFEFCSQLEVLKLQACKSLSDTSLEPLYKGGALPALQELDLSHGTLCQSAIDELLVCCTNLRRVSLNGCENVHDLKWGCSHGQVDVSPALKIPYGVSSHENVLESSQESTCLLQNLNCVGCTNIIKVEIPSRAHCLNLLFLNLSLSRNLKEVNITCLNLCFLNLSNCSSLEILRLDCPRLISLFLQSCSIDGEAVEAAISKCNMLETLDVRFCQKISSTSVARFRTSCSSLKRIFSNLSN* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2167 852 PANTHER OS10G0396666 PROTEIN 27 814 IPR044703 GO:0010252|GO:1905393
Ahy20g2167 852 SMART LRR_CC_2 789 813 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 569 594 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 438 468 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 814 839 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 480 505 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 543 568 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 617 642 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 670 701 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 366 391 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 410 434 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 247 272 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 320 345 IPR006553 -
Ahy20g2167 852 SMART LRR_CC_2 273 298 IPR006553 -
Ahy20g2167 852 Pfam F-box-like 79 118 IPR001810 GO:0005515
Ahy20g2167 852 MobiDBLite consensus disorder prediction 1 31 - -
Ahy20g2167 852 PANTHER OS10G0396666 PROTEIN 27 814 - -
Ahy20g2167 852 SUPERFAMILY RNI-like 403 632 - -
Ahy20g2167 852 ProSiteProfiles F-box domain profile. 70 116 IPR001810 GO:0005515
Ahy20g2167 852 SUPERFAMILY RNI-like 100 363 - -
Ahy20g2167 852 SUPERFAMILY RNI-like 586 835 - -
Ahy20g2167 852 SMART fbox_2 76 116 IPR001810 GO:0005515
Ahy20g2167 852 Gene3D Ribonuclease Inhibitor 319 457 IPR032675 -
Ahy20g2167 852 Gene3D Ribonuclease Inhibitor 608 702 IPR032675 -
Ahy20g2167 852 Gene3D Ribonuclease Inhibitor 72 318 IPR032675 -
Ahy20g2167 852 Gene3D Ribonuclease Inhibitor 703 851 IPR032675 -
Ahy20g2167 852 Gene3D Ribonuclease Inhibitor 458 607 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2167 Ahy-Chr20 120216682 120222473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2167 - - gmx:100782842 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2167 20 120216682 120222473 Ahy20g2167 20 120216682 120222473 ECH
Ahy20g2167 20 120216682 120222473 Ahy10g1724 10 97903140 97908743 hybridization