Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2154 ATGCAAAGAAACAAGTCACTTTGTGTTTGCCCCATTTTGAGTACTCTTCAATCTAGTGTCTTATTCGTGATGGGTAGCAGTACTACTACACAAAGATCACATTGTTGGCATTATTGGGGCATCATTGTAGCATGGCTTACATTGTTGGAAATGAAGATGATGGTGCATTATGTGAATGGTGAACTCAATTACAAGGAGGCTCTCACCAAGTCATTAATATTTCTAGAGGCACAAAGATCAGGAAAACTCCCTTCCAATAACAGGGTACCTTGGAGAGAAGACTCAGCCCTAGATGATGGAAAACTAGCTAATGTGGACCTTGTTGGAGGTTACTATGATGCTGGGGATAATGTAAAATATGGCCTCCCAATGGCTTTTACTATTACAACCCTATCATGGGCTGCAATTTTTTACAAATCAGAATTAGAAGCTACAAATGAAATGGGGAATGTTCATGATGCCATTAGATGGGGCACTGATTATTTTCTCAAAGCTAGTTCTAGACGCAAAAGATTATATGTCCAGGTAGGGGACCCGGAAGAGGATCACCATTGTTGGGTTCGACCGGAAAATATGAAGACGAAAAGAACGGTTTTGAAGATTGATAGTAACACGCCAGGGACTGAGATTGCAGCTGAAACCGCGGCGGCAATGGCGGCTGCTTCTATCGTTTTTAGGGACTCTGATCGTAAATATTCACATAGTCTCCTTAACAAAGCGAAATCGCTTTTTGTATTTTCGAAATCACACAAAGGAACCTATGACGGAGAGTGTCCCTTCTACTGCTCTTACTCAGGCTATAATGATGAACTTATGTGGGCAGCAACATGGTTATACATGGCTACGAGGAAGCCTGCGTATTTGAAGTACATAGAAGAAGAATCGATAAGTGCTAGCGTAACAGAATTTAATTGGGATCTTAAATATGCAGGAGCCCAAATCCTTCTTACCAAGTTACATTTTGAAGGAACAAAGAATTTGGACACATTCAAAGTTCATGCCGATAGTTTCATATGTTCAGTTCTTCCGGAAAGTCCCTATCATCAAATTAACTTATCCCCTGGTGGGTTCGTTCATTTGAGAGATGGTGCCAACACACAATATGCTACCGGGACAGCATTGTTGTTCACTGTGTATGGTGATTTGCTTGCCAAACATAAACAGAAAATCACTTGCGGAGACAAACAATTTGATCCCTCTCACCTCCTCTCCTTTGCTAAGATACAAATGGATTATATACTAGGGAAGAACCCTGAAGGAAGATCATACATGGTAGGGTTTGGGAAGAACCCACCAACACAAGCTCACCATAGAGGTGCATCCATGCAAAAGTTGCCAAAGGATGAAGAAGTAAACTGTCCCACGAGCTTCTCAAAATGGTTGAATAAAGACCAACCTAACCCCAATGAGCTCACCGGTGCTATTCTTGGTGGACCTGACGGCAATGACAAGTTCAAAGACAAGCGTTGGGAATCTGTTTACACTGAGCCATGCACATACATTAATTCTCTAGCAGTTGGACCTTTAGCCAAGCTTGCATCTTTGTCTTAA 1551 0.4172 MQRNKSLCVCPILSTLQSSVLFVMGSSTTTQRSHCWHYWGIIVAWLTLLEMKMMVHYVNGELNYKEALTKSLIFLEAQRSGKLPSNNRVPWREDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTITTLSWAAIFYKSELEATNEMGNVHDAIRWGTDYFLKASSRRKRLYVQVGDPEEDHHCWVRPENMKTKRTVLKIDSNTPGTEIAAETAAAMAAASIVFRDSDRKYSHSLLNKAKSLFVFSKSHKGTYDGECPFYCSYSGYNDELMWAATWLYMATRKPAYLKYIEEESISASVTEFNWDLKYAGAQILLTKLHFEGTKNLDTFKVHADSFICSVLPESPYHQINLSPGGFVHLRDGANTQYATGTALLFTVYGDLLAKHKQKITCGDKQFDPSHLLSFAKIQMDYILGKNPEGRSYMVGFGKNPPTQAHHRGASMQKLPKDEEVNCPTSFSKWLNKDQPNPNELTGAILGGPDGNDKFKDKRWESVYTEPCTYINSLAVGPLAKLASLS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2154 516 PANTHER ENDOGLUCANASE 16-RELATED 41 513 - -
Ahy20g2154 516 PANTHER ENDO-1,4-BETA-GLUCANASE 41 513 - -
Ahy20g2154 516 Gene3D - 59 516 IPR012341 GO:0005975
Ahy20g2154 516 Pfam Glycosyl hydrolase family 9 64 507 IPR001701 GO:0004553|GO:0005975
Ahy20g2154 516 SUPERFAMILY Six-hairpin glycosidases 62 514 IPR008928 GO:0005975
Ahy20g2154 516 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 412 438 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2154 Ahy-Chr20 119929722 119932364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2154 58 514 Glycoside Hydrolase AT3G43860 72.271 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2154 K01179 - gmx:100811509 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2154 20 119929722 119932364 Ahy20g2154 20 119929722 119932364 ECH
Ahy20g2154 20 119929722 119932364 Ahy10g1712 10 97523267 97525698 hybridization