Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2139 ATGAACTTGTCCAAGAAAGTATCCCAAACGGATGCAAAGCTAAGCAGCCCAAGCAAGGCAACCACTTTGAATCCAAATGCAGCAGAGTTTATTCCTTTTTCTCTCAGAACACCATTTTCTGGAACCACCAGCTCGGTTGATGCAACAGCAAGGCTGGCCAATGCTGGAGCTCTTGGAAAAGCCGTTTTAGATAGATCAGAATCATCCATTTCAAACAATTCAGAAGATGAGGTTCACCAATACTGGCGATGTCAGCTCCCTGATGATATAACCCCTGATTTCAAGGTTGTGGGAGAAGAGTCCCAAGGTCTTAATGACCTCTCTTTAGCAGGCTTATCCATACATGATGACATTGAAGGCTTGATGTTTCATTCTTCTAAAGGAAGTAGATATATATTCAATGAGCAGGAAGAATTATCTCAGCAGCACATTAATGGCAATAACTTTACTGATAGACTAAGGTTTTCCAATTCTAGCTTTCGGGAGGATCCATCTTCAGGAAGCACTTTGAACACTTCAGCGAATCCTTGGGATAGGCCAATTGGGAGTGCCAACAAGCTTGTTAGCAGTGGTCAAGAGGGGCTTACTTATGATGACAACTCAGGACATGGATTCTTAAATGACATCTTTGCTGAGAATGCAATCGTGGATGATACTAATTTGAACCCTTTGGAGTTTTTAGCTTCTCTGTTCCCTGGTTTTGCTGCAGAAAGCCTTGCAGAGGTTTACTTTGCCAATGGATGTGATTTGCATATGACCATTGAGATGCTCACACAGTTAGAGCTCCAAGTTGATGGTAGTTTCATTCAGAATCTGAATTCAAAGACGCTGTCAGCTCCCAATCTTAGTGCAATGGACTTCCCTGCACTTACATCACCGGATGGTCATACTGCTTCTGTCAGATTTTCTGTAGATAATGTCCAACAAAGTGGCAACCCTTACCGATCATCTGACAAAGACATTCTGTCTTTCAAAACTACCTCTTCAATTCCGTCTAGAGGTGCTATTGACTTTGCTTCAGCTGTGAGGAAGCTGGCTTCTCAGGACTCTGGTATTTGGAAGTATGATAAAAGTGGTTCTGGTGATGCTGCCATTGGCTCAAGCAGGACATCTCATGTTTTGGCTGGCTATGATGGTGGACAAGGGAGGGCCAGCTTCAGTGACAGGTTACAGAATCGTGGCTTAGCTCGGGGGTTAGCACCTGTTTGGCTTGAAACTGGTGACACAGTTGCAAATATGTACTCAGAACTGAGGGAGGAGGCCCGTGATCATGCACGCTTACGTAATGCATACTTTGAGCAGGCACGGCAAGCCTATCTTATTGGCAATAAAGCCCTGGCAAAGGAACTTAGTGCTAAAGGGCAAGTGCACAACATGCATATGAAAGCAGCTCATGGAAAAGCACAAGAGTCTATATATCGCCAGAGGAATCCAGTTGCTCCGGAGATGCAGGGCAATGGAAGAGGGCATGAGAGGATGATAGACTTACATGGGTTGCATGTGAGTGAAGCGATTCATGTGTTGAAATACGAACTGAGTGTGCTGAAAAACACGGCCAGAGCCGCCGATCAGCGCCTGCAGGTCTACATTTGTGTGGGGACAGGTCATCATACGAGGGGTTCCCGTACTCCTGCAAGACTTCCGATAGCTGTACAGCGTTTTTTACTCGAAGAAGGACTTGATTTCACAGAACCTCAGCCAGGCCTACTTCGTGTTGTGATATATTGA 1728 0.4508 MNLSKKVSQTDAKLSSPSKATTLNPNAAEFIPFSLRTPFSGTTSSVDATARLANAGALGKAVLDRSESSISNNSEDEVHQYWRCQLPDDITPDFKVVGEESQGLNDLSLAGLSIHDDIEGLMFHSSKGSRYIFNEQEELSQQHINGNNFTDRLRFSNSSFREDPSSGSTLNTSANPWDRPIGSANKLVSSGQEGLTYDDNSGHGFLNDIFAENAIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCDLHMTIEMLTQLELQVDGSFIQNLNSKTLSAPNLSAMDFPALTSPDGHTASVRFSVDNVQQSGNPYRSSDKDILSFKTTSSIPSRGAIDFASAVRKLASQDSGIWKYDKSGSGDAAIGSSRTSHVLAGYDGGQGRASFSDRLQNRGLARGLAPVWLETGDTVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQVHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGHERMIDLHGLHVSEAIHVLKYELSVLKNTARAADQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGLDFTEPQPGLLRVVIY* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2139 575 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Ahy20g2139 575 CDD CUE_CID7_like 221 263 IPR041806 -
Ahy20g2139 575 SMART SMR_2 491 575 IPR002625 -
Ahy20g2139 575 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 575 - -
Ahy20g2139 575 MobiDBLite consensus disorder prediction 159 183 - -
Ahy20g2139 575 MobiDBLite consensus disorder prediction 1 21 - -
Ahy20g2139 575 SUPERFAMILY SMR domain-like 492 573 IPR036063 -
Ahy20g2139 575 ProSiteProfiles Smr domain profile. 494 575 IPR002625 -
Ahy20g2139 575 SMART DUF1771_2 413 478 IPR013899 -
Ahy20g2139 575 Gene3D - 461 574 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2139 Ahy-Chr20 119389792 119394633 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2139 - - vun:114164614 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2139 20 119389792 119394633 Ahy20g2139 20 119389792 119394633 ECH
Ahy20g2139 20 119389792 119394633 Ahy10g1703 10 97242845 97247686 hybridization