Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2133 ATGGCCGTCGACGACAGGTGGTGCGTCGTCACCGGAGGTCGCGGCTTCGCCGCCCGCCACCTGGTGGAAATGTTGATCCAAGACAACACCTACTTTGTTCGCATCGCAGATCTCGGAGCCACTATCGAACTCGAACCGTCCGAACAACTCGGGACTCTAAGCCAAGCCTTGAGCTCTGGTCGCGCCCAATACGTCTCTCTCGATCTTCGTAATAAGGAACACGTCCTCAAAGCATTGGAAGGTTGTGAGGTTGTTTTCCACATGGCTGCTCCAAACTCATCCATTAACAACTATCAGCTTCATCATTCTGTCAATGTCCAAGGAACACAGAATGTCATTGATGCTTGTGTTCAACTTAGAGTGAAGCGGCTTGTTTACACCAGCTCATCTAGTGTTGTATTTGATGGCGTTCATGGAATTCACAATGGAAAGGAATCAATGCCCTATCCACCTAAGCATAATGATCATTATTCTGCTACTAAAGCTCAGGGTGAGGCATTGGTTTTGAAGGCTAATGGAACTAGTGGGATCCTGACATGCTCGCTACGTCCTAGTAGCATTTTTGGGCCTGGTGATAGACTGATGGTGCCTTCGTCAGTTGATGCTGCCAAGGCAGGGAAAACTAAGTTCATTATTGGTGATGGCAATAACATGTATGATTTCACTTATGTTGGAAATGTGGCTCATTCCCATTTATGTGCTGACCGAGCTCTAGCTTCAGAGGGGGAAGTTTCAAAAAAAGCTGCAGGAGAGGCATATTTCATAACAAATATGGAACCTATAAAATTTTGGGAATTCATGTCACTTATTCTAGAAGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGCCTTTGTTCTCATGCCAATTGCACTATTGGTGGAATATACATATAAGCTGCTAGGTCCATATGGTATGAAGGTGCCTCAGTTAACACCTTCAAGAGTAAGACTCCTATCTTGCAACAGAACTTTTGATTGCTCAAAAGCAAAGGAGCGCCTTGGATATGAACCCATTGTAACGCTAAAGGAGGGTTTGCGTAGGACAATTGATTCATTTTCACACTTGAGGGCTGAAAATCAACTCAAGCCCAAAAGAGAAGGTCCCTCGAAAGCTTCAGTATATCTTGGGAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAGAAAGCGAACGATCACCACATTGTTAGTCTTGATTGCAATATACTTAAGCTTCATTGCACCTGGGAATACTTTCATTACTGCTCTTTCAAAGCTTCTGTTGTTCGTATTGATCTTTTTATTCATTCATGGGATTCTACCGGCAAAAGTATTGGGGTACACTGTTCAGAAAATGCCCAAATCCTGGTTTCACTTATCAGAAGACATGTCACATCAACTTGCTGTCTCCGTGGTATCAGTATGGAATATTCCTATGAATGTTTTGAAATCCCTTGCACAAGGGACCGAGTGGATGCTATTCTTTAAGGTTGTTTTCTCTTTGCTCCTTCTTAGCTTCTTTGGTGCATTTTCACTTCAGAACTTATATAAGATAGGACTTACCACTGCATTTATTGCTTTCTACATTTATGAAAAGAAAGAGGAAGAAATTGATGACTTATTCATAAAAGCACTTTCTTTTGGATGCAAATTGAAATCTGATGCCATAAGGAAGTTCCTTCCTTCTAAGAAGAGTGAGTGA 1689 0.4251 MAVDDRWCVVTGGRGFAARHLVEMLIQDNTYFVRIADLGATIELEPSEQLGTLSQALSSGRAQYVSLDLRNKEHVLKALEGCEVVFHMAAPNSSINNYQLHHSVNVQGTQNVIDACVQLRVKRLVYTSSSSVVFDGVHGIHNGKESMPYPPKHNDHYSATKAQGEALVLKANGTSGILTCSLRPSSIFGPGDRLMVPSSVDAAKAGKTKFIIGDGNNMYDFTYVGNVAHSHLCADRALASEGEVSKKAAGEAYFITNMEPIKFWEFMSLILEGLGYERPRIKIPAFVLMPIALLVEYTYKLLGPYGMKVPQLTPSRVRLLSCNRTFDCSKAKERLGYEPIVTLKEGLRRTIDSFSHLRAENQLKPKREGPSKASVYLGSGRVADTLLWKDRKRTITTLLVLIAIYLSFIAPGNTFITALSKLLLFVLIFLFIHGILPAKVLGYTVQKMPKSWFHLSEDMSHQLAVSVVSVWNIPMNVLKSLAQGTEWMLFFKVVFSLLLLSFFGAFSLQNLYKIGLTTAFIAFYIYEKKEEEIDDLFIKALSFGCKLKSDAIRKFLPSKKSE* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2133 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
Ahy20g2133 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Ahy20g2133 562 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 359 - -
Ahy20g2133 562 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 4 359 - -
Ahy20g2133 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 355 IPR036291 -
Ahy20g2133 562 Pfam Reticulon 382 538 IPR003388 -
Ahy20g2133 562 Gene3D - 2 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2133 Ahy-Chr20 119119926 119128607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2133 9 371 Lipid Metabolism Gene Families AT2G33630 31.759 4.20e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2133 K23558 - gmx:100816854 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2133 20 119119926 119128607 Ahy20g2133 20 119119926 119128607 ECH
Ahy20g2133 20 119119926 119128607 Ahy10g1695 10 96938590 96947301 hybridization