Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2129 ATGCTGAAAGATCCGATAAACCCCTCAGCGAGGAAGCTCATCGGAGCTTCAATTCTTTTCCGTCGATGGATGACGACCAGCAAGAGGGTTCAAGACAGGAGTAAGCAGAAGAGGGTTAACGATCTTGAGGTCGCAACCGAGAAGTGGAAGATACTCTCCAAAATCCTCTTCTTAATCGAGCTTCTGAAGCAACAGTCCGAGATGATTATCCCTGTTAGATCCCTTGAAAACTATCGTAAGCAGATCAATCTCCCAAAGCCACACAGAATCTCTGATTTCATTCGAAAGACGCCAAAGCTCTTTGAACTCTACAAGGATCGCAAGGGGGTGCTGTGGTGCGGCTTGACGGAGAGAGCCGAGGAATTGTTGCAGGAAGAACGGAGAGTTCTTGAGCAGCATTCCGATAAGGCTGCGGAACACGTTACGAGGTTGCTGATGATGTCGGTGGATAAGCGTCTCCCATTAGAGAAGATTGCTCATTTCAGAAGGGATTTTGGGTTGCCTATGGATTTTAGGGCTAATTGGGTGCACCAATATCCGCAGCATTTTAGGGTTGTGAAGTCCTTTGATGGCATTAATCAAGTTGAGTGCTTGGAGCTTGTGAATTGGAATCCTAATTGGGCAATAACGGAATTACAGAAGAAGGTTACAGGTGTAACTGAATCCACTACTACCAATTTGCATATCCCTGGTATGCTGTCACTTCCATTCCCTTTGAAATTCCCTTCAAATTATAAAAGGGTGTATCGTTATAGTGAAAAGATTCAAGATTTTCAAAAGAGGGCTTATTTGTCTCCTTATGCTGATGCAAGAGGTCTCAAGGCTGGTTCTCTTGAATTTGATAAGAGGGCTGTTGCTGTTATGCATGAGATTCTTAGTTTCACCATTGAAAAGAGACTGGTCACTGACCACCTCACTCATTTCCGTTGGGAGATAGTGATGCCTCAGAAGCTCATGAGGATTCTTCTGAAGCACATTGGCATCTTCTATGTCTCTGAGCGGGGGAAGAGGTTTAGTGTGTTCTTGAATGAAGCATATGAAGGTGCGGAGCTGATTGAAAAATGCCCCTTGGTCCTATGGAGGGAAAAAGTCATGAGGCTTGTTGGTAATAGAGGGAGGAAGAAGAAGTTTGAGATACTCAGCGACATGTCGGATGTAGAAGTAGAATGCGATATTGGCTTGATGCAGAGTGATTCGGAAGTAGAGGACTTGGACGTGCAGCTTGAGCAACATGGTTCCGTGGATTATGAGGATCCTTTACTTGTGGACAATTCTGAGATGGATGTTGAAGAGATTGCCTGTGAATATCGAAATTTTAAGAATTCTTGA 1329 0.4432 MLKDPINPSARKLIGASILFRRWMTTSKRVQDRSKQKRVNDLEVATEKWKILSKILFLIELLKQQSEMIIPVRSLENYRKQINLPKPHRISDFIRKTPKLFELYKDRKGVLWCGLTERAEELLQEERRVLEQHSDKAAEHVTRLLMMSVDKRLPLEKIAHFRRDFGLPMDFRANWVHQYPQHFRVVKSFDGINQVECLELVNWNPNWAITELQKKVTGVTESTTTNLHIPGMLSLPFPLKFPSNYKRVYRYSEKIQDFQKRAYLSPYADARGLKAGSLEFDKRAVAVMHEILSFTIEKRLVTDHLTHFRWEIVMPQKLMRILLKHIGIFYVSERGKRFSVFLNEAYEGAELIEKCPLVLWREKVMRLVGNRGRKKKFEILSDMSDVEVECDIGLMQSDSEVEDLDVQLEQHGSVDYEDPLLVDNSEMDVEEIACEYRNFKNS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2129 442 Pfam Plant organelle RNA recognition domain 37 371 IPR021099 GO:0003723
Ahy20g2129 442 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 433 IPR045040 GO:0003723
Ahy20g2129 442 PANTHER EXPRESSED PROTEIN 23 433 - -
Ahy20g2129 442 Coils Coil 116 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2129 Ahy-Chr20 119029681 119032490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2129 - - aprc:113865655 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2129 20 119029681 119032490 Ahy20g2129 20 119029681 119032490 ECH