Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2105 ATGAAGATAGCAGTGGAAGGGTGCATGCATGGCGAACTCGACAATGTCTACAAAACCCTCAAGCATCTCGAGGAAACCCAAAACATCAAAATCGATCTCCTCCTCTGCTGCGGAGATTTCCAGGCTGTTAGGAATGAGCAAGATTTGAAAAGCATGAACGTTCCCCCGAAATTCCGATCCATGAATTCCTTCTGGAAGTACTATTCTGGCTTGGAGGTTGCTCCTTATCCTACCATCTTCATCGGTGGCAACCATGAAGCCTCCAATTACTTGTGGGAAATGTATTATGGAGGATGGGCTGCACCTAATATATATTTCTTGGGAGTTGCTGGGGTAATCAAGTTTGGGAATGTTCGAATTGGTGGGCTTTCCGGAATTTATAATGCTCGCCACTATAAATCAGGACACTTTGAGAGACCTCCCTATGATCAGAGCACCATCAGGTCTGTGTATCATGTTCGAGAATACGATGTTCACAAACTCATGCAAATTGAGGAACCGATTGATATCTTTCTTTCTCATGATTGGCCCGTGAGAATCACTGATTGTGGGGATTGGAGGGAGCTTGTACGGCGAAAGCCCTTTTTTAAGCAGGAGATTGAGGAAGGAAGACTTGGGAGTAAAGCTGCTTCTCAACTTCTAGGTAAACTGAAACCACAATATTGGTTTTCTGCTCATTTACATTGCAAGTTTGCTGCTCTTGTTCAGCACGGGGAAGGAGGTCCGCTGACAAAATTCCTTGCACTTGATAAATGTCTTCCTCGGCGCGACTTCTTGCAGATAGTGGAAATCGAATCAGAGGCAGGCCCTTATGAGATTCAGTATGATGAAGAATGGTTAGCCATAACAAGGAGGTTCAACTCTATATTCCCGCTGACACCCAAGGGTGCAGATTTCAGAGGTGTGAATCTTGAGATGGATGATTGTCGCCAATGGGTTAGAAGCAGGTTACAACAGAGAGGGTGCAAACCTTTTGAATTTGTTAAAACTGCTCCGTGTTATGATCCTTCTCAATCCAATTTTCATGGTTCTTTTGCTGGTTGTCCTCGGAATCCTCAAACAGAATCTCTTTTACAGTTTCTTGACCTTCCATACCTCCTTGATAAGAATCCTGAATCAACTGACTTGTCACCTTATCCTTCTCGCTCCATTGGAAGAGGCCCTGTCGATTATGACAGTGAAGACATTCCTATTGATGATTTGGAAGATGATGATCTCTCAAATGTTCAAGACGTGGAAACTGAACTTTGA 1251 0.438 MKIAVEGCMHGELDNVYKTLKHLEETQNIKIDLLLCCGDFQAVRNEQDLKSMNVPPKFRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWEMYYGGWAAPNIYFLGVAGVIKFGNVRIGGLSGIYNARHYKSGHFERPPYDQSTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPVRITDCGDWRELVRRKPFFKQEIEEGRLGSKAASQLLGKLKPQYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSIFPLTPKGADFRGVNLEMDDCRQWVRSRLQQRGCKPFEFVKTAPCYDPSQSNFHGSFAGCPRNPQTESLLQFLDLPYLLDKNPESTDLSPYPSRSIGRGPVDYDSEDIPIDDLEDDDLSNVQDVETEL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2105 416 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
Ahy20g2105 416 MobiDBLite consensus disorder prediction 371 416 - -
Ahy20g2105 416 Gene3D - 8 244 IPR029052 -
Ahy20g2105 416 MobiDBLite consensus disorder prediction 394 416 - -
Ahy20g2105 416 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Ahy20g2105 416 SUPERFAMILY Metallo-dependent phosphatases 1 243 IPR029052 -
Ahy20g2105 416 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 382 - -
Ahy20g2105 416 CDD MPP_Dbr1_N 3 259 IPR041816 -
Ahy20g2105 416 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2105 Ahy-Chr20 118180797 118183637 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2105 K18328 - gmx:100812726 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2105 20 118180797 118183637 Ahy10g1669 10 95968398 95971259 hybridization