Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2102 ATGGCCACGGGTGCTAGGTGTCGCGGTGGGTCTGCGGTGGTTTCCGAAACGTTGCAATTACAGGGTAAAATTGTCATATCACCTTCAATCAAATACTACTATAAGAGAAGTAGTTGTGGGCCGTTAAGAGTGCGCGCGTCCACGGCTGATTCTTCCTCCGATTTCGCAAAGCGCATGGAACGCGCCTGGTTAATCTCTCAGCAACCAAAACCAATTGCGTGTTCATCTTGCAACTCAAAAGGGCATATCGAATGTAAATGGTGTAGTGGTACTGGTTTCTTTATTATTGGCGATAACATGCTTTGTGAAGTTCCTTCCAAAAACACCAGCTGTATCATTTGTTCTGCCAAGGGATCAATGTGCTGCTCTGATTGTCAGGGAACAGGTTTTCGTGCTAAGTGGTTGGAACACCCCCCTTCTTCACAATAG 429 0.4639 MATGARCRGGSAVVSETLQLQGKIVISPSIKYYYKRSSCGPLRVRASTADSSSDFAKRMERAWLISQQPKPIACSSCNSKGHIECKWCSGTGFFIIGDNMLCEVPSKNTSCIICSAKGSMCCSDCQGTGFRAKWLEHPPSSQ* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2102 142 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 41 141 - -
Ahy20g2102 142 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 72 131 IPR036410 -
Ahy20g2102 142 PANTHER OS09G0423700 PROTEIN 41 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2102 Ahy-Chr20 118111144 118112499 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2102 - - lja:Lj0g3v0271799.1 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2102 20 118111144 118112499 Ahy10g1657 10 95746220 95747623 hybridization