Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2080 ATGAATCGTAACAATGAGACTCGAAAGAAGAAGAAGAGCCTCTTATTTGAATCCTCAAACCCAAACCTTACTAACTTCCCACGCCGCTTAAGCGTCGCAGATATTCTTCTCACCGGTGACGAAGACGAAAACGACGCTAATTCCATGGCCGGCGTCGGAAAACCTTCGCTGTCTGCCAGATGCTATTCGCCTTGGCGACTTCTTGCTAGGTTGCTTAAGGTGCTGAGGCACACTAAGGGACACACAGCGGCTCTGCGACGGAGGCAGCAGAATGAGACTCCTCACTCCACCGCGACTACGCCGTCGCTGATAAACGTATCAAATGGCAGTAAGGAGTTCGGAGAGTTGCACGATGATGCTTCTTTTAAGCTAGGAGTTGGTTGTGGTTTACTATATATGATTGCAGCTAGTAAAAATGAGCTTGGGAAGATGGTTGAATTGCGGAAAGAAATGGAAATGCTCCTTCAAAATGTGAAAGGGGTACTGCAGAGTAAAGATGCACTTATCAAGCCATTGAAGCAGAACGATGCTCTCACCTGTTCCATAACTGATGTTCAAGAAGTTTCCGACTTTCACAGTCCTCTTTCAGTTCATTCAAAAACACCATATGTTCACCAAGAGTCAACAAGTGGAGTGGTTCATAAACATTTTCTAGAATATAATATAAATGACCGTAATAAACTTGCAGAAGAAATAAATGAGCTTGAGGCAGAATTTGAAGTTGAGTTAGAACGGTTGCAGCTGTATATGGATAGAGAAGCTGTGTATGAAGATGCAAAACACGAAATAGTTAAGGTAAATGCTGAGGACTCCCATTCAAAGAGCCATAGTTTGAGTTCTGGTGAAATAGTAATGGACCCGCAAGGAGCATGTGCTGATGTATCTTTTGCAGTTCCTCCAGTTGAACTGGAGAGAAGATTGCATGAACTGCTACAAGCAAGAATGCAAGAACAGATATCGGAGTTGGAGTCTGCTTTAGAATGCACCACTCATAAGCTTGCTGAGAAAGAGATTGAGGTTACTTGGTGGAAAGACACTGCAAAACTTGTGTCGCAGCACCTTCCAGAAACTTCTCGGTTTACTTTCCGTCTTGATCCTGATACTGCTTTGAAGTTGAGTCAAGTTGTATAG 1131 0.435 MNRNNETRKKKKSLLFESSNPNLTNFPRRLSVADILLTGDEDENDANSMAGVGKPSLSARCYSPWRLLARLLKVLRHTKGHTAALRRRQQNETPHSTATTPSLINVSNGSKEFGELHDDASFKLGVGCGLLYMIAASKNELGKMVELRKEMEMLLQNVKGVLQSKDALIKPLKQNDALTCSITDVQEVSDFHSPLSVHSKTPYVHQESTSGVVHKHFLEYNINDRNKLAEEINELEAEFEVELERLQLYMDREAVYEDAKHEIVKVNAEDSHSKSHSLSSGEIVMDPQGACADVSFAVPPVELERRLHELLQARMQEQISELESALECTTHKLAEKEIEVTWWKDTAKLVSQHLPETSRFTFRLDPDTALKLSQVV* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2080 376 Coils Coil 312 339 - -
Ahy20g2080 376 MobiDBLite consensus disorder prediction 1 20 - -
Ahy20g2080 376 Coils Coil 218 252 - -
Ahy20g2080 376 MobiDBLite consensus disorder prediction 1 15 - -
Ahy20g2080 376 PANTHER EMB|CAB62613.1 32 368 IPR040348 GO:0008356
Ahy20g2080 376 ProSiteProfiles Ig-like domain profile. 299 376 IPR007110 -
Ahy20g2080 376 PANTHER PROTEIN POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 32 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2080 Ahy-Chr20 117624049 117626699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2080 - - gmx:100795319 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2080 20 117624049 117626699 Ahy10g1637 10 95121275 95123740 hybridization