Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2074 ATGGCTTTGGGATTCTTCGGCCTCGCTCTCTTCCTCTTCCTTACCCTCGATTATGACGTCGGTGCTTCTCCATCCGCTTCCGCTTCCGCCTCTGCTGCCTCCTCGGAAGGCGTCGAGGTGCACATCACTTATGGATCGGTTATAAAGCTTATGCACGAGAAGACCAAGTTTCGTTTGCATTCCCATGATGTTCCGTATGGTTCTGGCAGTGGACAACAATCGGTTACTGGTTTTCCCAATGTTGATGATTCCAATAGTTACTGGATTGTTAGACCTGAGCCAGGAACTTCTGCTAAACAAGGTGACACCATTAAAAGTGGTACAATCATTAGATTGCAGCACATGAGGACCAGGAAGTGGCTGCACAGCCATTTGCATGCTTCCCCAATATCAGGCAATCTCGAGGTGAGTTGCTTTGGAGGAGAGTCTGAGTCTGACACTGGGGACTATTGGAGGCTTTTTATAGAAGGAAGTGGGAAGACATGGAAACAAGATCAGAGGATCAGGCTTCAGCATGTGGACACCGGAGGCTATCTACATAGTCATGATAAGAAATACTCTCGGATTGCTGGAGGGCAGCAAGAGGTTTGTGGTTTACGTGAAAAACGTGCGGACAATGTCTGGTTGGCAGCTGAAGGCGTCTACCTTCCTGTTACTGAAAGCAAATGA 669 0.4813 MALGFFGLALFLFLTLDYDVGASPSASASASAASSEGVEVHITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPEPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLFIEGSGKTWKQDQRIRLQHVDTGGYLHSHDKKYSRIAGGQQEVCGLREKRADNVWLAAEGVYLPVTESK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2074 222 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 222 - -
Ahy20g2074 222 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 222 - -
Ahy20g2074 222 ProSiteProfiles MIR domain profile. 101 156 IPR016093 -
Ahy20g2074 222 SUPERFAMILY MIR domain 40 213 IPR036300 -
Ahy20g2074 222 Gene3D - 25 222 - -
Ahy20g2074 222 ProSiteProfiles MIR domain profile. 39 93 IPR016093 -
Ahy20g2074 222 ProSiteProfiles MIR domain profile. 159 213 IPR016093 -
Ahy20g2074 222 Pfam MIR domain 74 206 IPR016093 -
Ahy20g2074 222 SMART mir_2 159 213 IPR016093 -
Ahy20g2074 222 SMART mir_2 39 93 IPR016093 -
Ahy20g2074 222 SMART mir_2 101 156 IPR016093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2074 Ahy-Chr20 117154341 117157047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2074 - - gmx:100811638 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2074 20 117154341 117157047 Ahy20g2074 20 117154341 117157047 ECH
Ahy20g2074 20 117154341 117157047 Ahy10g1631 10 94366058 94368802 hybridization