Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2069 ATGTCGATTTTACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTATGGAACGATAACCTAGAGGAGGAGTTCGCTTTGATCCGTGAAATCGTTGACGAATACAACTATGTCGCCATGGATACTGAATTCCCCGGTGTTGTTCTTCGTCCCGTTGGGAACTTCAAGAATATCAATGACTACAACTACCAGACCTTGAAGGACAACGTTGACATGTTGAAGCTGATCCAATTAGGTCTCACTTTCTCTGACGAGCACGGCAACCTCCCCACCTGTGGCACTGAGAGCTCCTGCATCTGGCAATTCAACTTCCGTGAGTTCAACATCAGCGAGGACATCTTCGCCAGCGATTCGATCGAGCTTCTGCGCCAATGTGGCATTGATTTCAAGAAGAACAACGAAAAAGGTATTGATGTGAACCGGTTCGGGGAGCTTCTCATGTCATCGGGGATCGTGTTGAACGATGGTGTGAGTTGGGTAACCTTCCATAGCGGTTACGACTTCGGTTACCTCCTCAAGCTGTTGACGTGCCGAAGCTTGCCGGATACGCAGGCAGGGTTCTTTGAACTGATCAAGATGTATTTCCCGATGTTGTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAGCTCGCGGAGTTGTTGGATGTTGAGAGAGTTGGTGTGTGCCATCAAGCTGGATCGGATAGCTTACTCACTTCTTGTACATTTAGAAAGTTGAGGGATACATTTTTCAGTGGCTCCACGGAGAAATATGCTGGTGTCTTGTATGGTTTAGGTGTTGAGAATGGACAAACTAATTGA 822 0.4684 MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTESSCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVSWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFELIKMYFPMLYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLLTSCTFRKLRDTFFSGSTEKYAGVLYGLGVENGQTN* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2069 273 Gene3D - 2 269 IPR036397 GO:0003676
Ahy20g2069 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Ahy20g2069 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 272 IPR039637 GO:0004535|GO:0030014
Ahy20g2069 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Ahy20g2069 273 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2069 Ahy-Chr20 116621148 116622879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2069 K12581 - gmx:100785970 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2069 20 116621148 116622879 Ahy20g2069 20 116621148 116622879 ECH
Ahy20g2069 20 116621148 116622879 Ahy10g1624 10 93863822 93865550 hybridization