Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2031 ATGTGGATATCGAAGACCATCTTCAACCACTTCAAATCCAGGCTCAACTTCACACCTAACTATGCACCACTATCTCTTCTCTCTCCGCGCCGATTTGCATCCACCATAGCTCAAAATCCTTCCACCTTCAATTCCATCCACGATGCTAACCAGGTTATCGATTTTCCTGGAGGAACAGTGAAGTTCATCCCGGAAATGAGATTTATATCTGAAACATCTCCAAAGAGAATACCCTGCTACCGTGTCCTCGACGATGATGGACAGCCTCTGGCCAATAATTTTGTCCAGGTTAGTGAGGAAGTTGCTGTAAGGATGTACAGTAACATGGTTACACTACAAATTATGGACACCATTTTCTATGAAGCGCAAAGGCAGGGCAGAATATCTTTTTATGCAACGACCATTGGAGAAGAGGCCATAAATATTGCATCAGCTGCAGCTCTTACTAGGGAAGATGTTATTTTCCCTCAGTATAGGGAACCAGGACCTCTGTTATGGCGTGGTTTCACATTGCAAGAAATTGCACACCAGTGTTTTTCCAATAAATACGACAATGGAAAAGGAAGGCAAATGCCAATACATTATGGGTCCAACAAGCATAATTACTTTACTGTAGCATCAACTGTTGCTACACAAGTTCCCCATGCTGTTGGAGCTGCATATTCCTTAAAGATGGACAAAAAGGATGCATGTTCTATCACTTACTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGCTTTAAATTTCGCAGCAGTTATGGAGGCCCCAGTTATTTTTCTATGCCGAAACAATGGATGGGCTATCAGCACCCCGACTTCGGATCAGTTTCGAAGTGATGGTGTTGTCGTGAAAGGACAGGCATATGGAGTCCGCAGCATTAGAGTAGATGGCAACGACGCCCTGGCCATTTATAATGCTGTTCAAGCTGCTCGTGAAATGGCAATCAGTGAAGAGAGACCAGTTCTAATAGAAGCTCTTACATATAGAGTAGGACACCATTCAACATCGGATGACTCCACCAAGTATCGTCCAGCCAATGAGATTGAATGGTGGAGGCTCGCTCGAGATCCGGTGGCTAGGTTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGACATGGCTGAATCAGAGCTTAGGAACAGTCTGAGACAGCAGCTTCTGCATTCAATTCAAGTGGCAGAGAATATAGAGAAGCCTCCAATTGAAGATATATTTAACGACGTTTATGATGTGCCTCCATCCAATCTTCGTGAGCAGGAGCAATGGGTCAAAGATACCATAAAAAAGCATCCGTTAGATTACCCAGAGAATATTTCTGCATAG 1335 0.4382 MWISKTIFNHFKSRLNFTPNYAPLSLLSPRRFASTIAQNPSTFNSIHDANQVIDFPGGTVKFIPEMRFISETSPKRIPCYRVLDDDGQPLANNFVQVSEEVAVRMYSNMVTLQIMDTIFYEAQRQGRISFYATTIGEEAINIASAAALTREDVIFPQYREPGPLLWRGFTLQEIAHQCFSNKYDNGKGRQMPIHYGSNKHNYFTVASTVATQVPHAVGAAYSLKMDKKDACSITYFGDGGSSEGDFHAALNFAAVMEAPVIFLCRNNGWAISTPTSDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYNAVQAAREMAISEERPVLIEALTYRVGHHSTSDDSTKYRPANEIEWWRLARDPVARFRKWIERNGWWNDMAESELRNSLRQQLLHSIQVAENIEKPPIEDIFNDVYDVPPSNLREQEQWVKDTIKKHPLDYPENISA* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2031 444 Pfam Dehydrogenase E1 component 108 405 IPR001017 GO:0016624
Ahy20g2031 444 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 28 443 - -
Ahy20g2031 444 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 88 438 IPR029061 -
Ahy20g2031 444 Gene3D - 48 443 - -
Ahy20g2031 444 CDD TPP_E1_PDC_ADC_BCADC 105 397 - -
Ahy20g2031 444 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 28 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2031 Ahy-Chr20 115006626 115010700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2031 31 282 Acyl Lipid Metabolism Gene Families AT5G09300 75.194 3.04e-143 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2031 K00166 - gmx:100779198 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2031 20 115006626 115010700 Ahy20g2031 20 115006626 115010700 ECH