Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2019 ATGATGATGGCGTTCTCTCTCTGCCACACCTCTTCTTTCTTCATCGTTCACCGCTTCCCACAACAAACTTTGATAAGAACAAGACGAATTCATTTCCAATTGATTCGTGCAGTGCAATCAGGGGAATCAGAAACTGAAAAGTCTGCACAGAAAAAGACTGAAGAATCACCATCTTCAACTGCTGCTGCTTCTCCTCCTCCTAGACCAAAGAAACCCGTCTATTCTATGAAGAAGGGCCAGATTGTGAGAGTGGACAAAGAAAAATATCTCAACAGCATCAATTATCTTTCTGTTGGGCATCCGCCATACTACAAAGGATTGGATTACATCTATGAAGACCGTGGGGAGGTCCTGGATATGCGTATATTTGAAACAGGGGAGTATGCACTTATTGCATGGGTAGGAATCCCCACTGCCCCGGCTTGGCTTCCAACAGACATGCTTATCAAGTCAGAGAAGCTCAATTATGAGAGGCTATGA 480 0.4417 MMMAFSLCHTSSFFIVHRFPQQTLIRTRRIHFQLIRAVQSGESETEKSAQKKTEESPSSTAAASPPPRPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2019 159 MobiDBLite consensus disorder prediction 41 75 - -
Ahy20g2019 159 Pfam Cyanobacterial and plant NDH-1 subunit O 76 150 IPR020905 GO:0005886|GO:0016655
Ahy20g2019 159 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 3 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2019 Ahy-Chr20 114238886 114240249 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2019 - - gmx:100500669 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2019 20 114238886 114240249 Ahy20g2019 20 114238886 114240249 ECH
Ahy20g2019 20 114238886 114240249 Ahy10g1584 10 92135793 92137148 hybridization