Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1993 ATGGCTTCTAAGATGCTCTTGTTGTTTCTCTTTTTTGTAGCACAACAGCAATATAACTTAGTGAAAGGAGATACAACTTTGATAAAGAGAACTTGCAAGAACACAAAGTACTATAACCTATGCTTCTCTTCCCTAAAATCTGATCCTAGTAGCCCAACCGCAGATTCAAAGGGCTTAGCAGTGATCATGGTTGGAATTGCAATGACCAATGCAACCTCAACTTCTTCCTATTTGTCCTCTAAGCTTCTTAGTCCAAAAACCAACAGCACAACCTTAAAAATGGTCCTCAAAGAATGTGCAGACAAATACTCTTATGCTGGTGATGCACTCCAAGATTCGGTTCAGGAACTTTCTGATGAGAACTATGACTATGCTTACATGCACATCACTGCTGCAAAAGATTACCCAAATGCATGTCACAACGCTTTCAGACGCTACCCTGATTTGGTTTATCCTCGTGATCTTGCTCGTAGAGAAGAAGGTTTGAAGCATATATGTGATGTGGCTATGGCTATTATTGATAACCTTGATTGGTAG 537 0.3985 MASKMLLLFLFFVAQQQYNLVKGDTTLIKRTCKNTKYYNLCFSSLKSDPSSPTADSKGLAVIMVGIAMTNATSTSSYLSSKLLSPKTNSTTLKMVLKECADKYSYAGDALQDSVQELSDENYDYAYMHITAAKDYPNACHNAFRRYPDLVYPRDLARREEGLKHICDVAMAIIDNLDW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1993 178 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Ahy20g1993 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 176 IPR035513 -
Ahy20g1993 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 176 - -
Ahy20g1993 178 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 10 176 - -
Ahy20g1993 178 Pfam Plant invertase/pectin methylesterase inhibitor 27 172 IPR006501 GO:0004857
Ahy20g1993 178 CDD PMEI_like 32 175 - -
Ahy20g1993 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 176 IPR035513 -
Ahy20g1993 178 SMART PMEI_2 23 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1993 Ahy-Chr20 113133291 113134090 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1993 - - gmx:100306461 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1993 20 113133291 113134090 Ahy20g1993 20 113133291 113134090 ECH
Ahy20g1993 20 113133291 113134090 Ahy10g1557 10 90899164 90899937 hybridization