Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1979 ATGGCGCCGGCGAAGAAGGGGAAAGCGAAGGCCGAACCCAAGGCGCAGTCTCCGCCACAAACATCAGACAAATTTCCATCTTGTATAAGGATCATGTCTCCTTCTTCCGTCGCCGTAACCATCCACGCCAAACCCGGATCCAAATCCGCATCCGTAACAGATATCAGCGATGAAGCGGTAGGAGTTCAAATCGACGCGCCCGCCAGGGATGGAGAAGCAAACGCCGCTCTTCTCAATTACATTAGCTCTGTTTTAGGTGTAAAACGAAGGCAAGTTTCTATAGGAACTGGTTCTAAATCAAGAGACAAGACGGTGATTGTGGAGGAGGTAACTCAGCAATTTGTTTTTGACGCATTGGATAAAGTCTCAAAGCAGCAGTGA 381 0.4882 MAPAKKGKAKAEPKAQSPPQTSDKFPSCIRIMSPSSVAVTIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANAALLNYISSVLGVKRRQVSIGTGSKSRDKTVIVEEVTQQFVFDALDKVSKQQ* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1979 126 SUPERFAMILY YggU-like 27 112 IPR036591 -
Ahy20g1979 126 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Ahy20g1979 126 SMART DUF167_2 33 109 IPR003746 -
Ahy20g1979 126 MobiDBLite consensus disorder prediction 1 27 - -
Ahy20g1979 126 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Ahy20g1979 126 PANTHER OS04G0686300 PROTEIN 1 125 - -
Ahy20g1979 126 Gene3D - 28 124 IPR036591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1979 Ahy-Chr20 111716885 111717792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1979 K09131 - gmx:100527290 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1979 20 111716885 111717792 Ahy20g1979 20 111716885 111717792 ECH
Ahy20g1979 20 111716885 111717792 Ahy10g1544 10 89871790 89872696 hybridization