Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1978 ATGGGAGCGTCTCAGTCTACAGAGCCCGCGGTTTCCGCCGAACAAAGGGAGGCAGAATCCGTCGCAGCCTCCACCGGTACTCTCCCTCTCCTCCACAAAGCCTTCTCCAACCTCTCCAATCCCCAAACTAATGCTGTCCCCTTCGAAAATCTTCCGCAATGCTTCGGTTTCGCACGCGAAGATCGAACCTACTCCGGCAACAGCGTCCCGGCTTCGTTTCCAGTTTTGTTGGATCACTTAGGTTCCTCAATCGTCGATCAATTTTTCGTTCCCGGCAAAGGTGGAATCGATTGGCTTCAGTTCGTTAATGGCTTCAATAAGTGCTGTGCTAGGGTTTCTGCGTCTGTTTCACTTAACATGCTTTTCAGAGTGTTTGCTGCAATGGCTTTGAAAGCGAATGTGCCTCTGCATTTGGTGTTTGAGTCTGAGGATGATGAATGCAAGATTAATGGTCACCTTCTTCCGAGTGATGTGCTTCTTCTTCTTTACGTGTGTTGGGTTATGTCTTGGGATTGTAGAAATTTGGGAAATTCTGAAAGGAAAGGGAATGTTAGGTTACCTGATCTTAGCCATTTGGTGTTGTCAGCGATCACATCTTGTAGCAAAGTTGAGGGTGGCTTCAATGTGTGGGATTGTGATGTATCAAGTTTGGGAGTTGAACTTCCTGCAGGGAAGTTTGTTACTTGGGTTATGAGTACGGTGCCATGTCTTCCAGATTGCTTAAGGCAGTATTTTCATGCAAGAATACAAATGGCAGGGGATCAATTGGAATATTTGAATTCCTCTACTGGAGATATTTCATCTGCCGCAGCATGTGATTATATTTTAACCCAAGGAAGAGCGTGGGCAATATCTATCACACAAAAAAGTACAGTAAATGATGAGATTTCAAGAGTATTTTTATGCAGTGGAAGTGGAATGGATAAAAACCTTCTATATCGGTCATCTACTCATGGACGAGGCCTCAATAGATTTTGGTCTCATGTAGAAGGTTACAAGGGTCCACTGCTAATTTTGATTGCCGCAAGTTCAGGAAATGCTCGTGAGGGAAGTTCCACTGATAGGAAATGGGTTATAGGTGCCCTGACAAGTCAAGGTCTTGAAAATAAGGATACCTTCTATGGAGCTTCTGGATGTTTATATTCAATAAGCCCTGTGTTTCATGCATTCCCACCCAGTGGTAAGGAAAAGAATTTTGTTTATAGCCACTTGCATCCTACTGGTAGGGTGTACCAGGCGCATCCAAAACCAGTGGGAGTTGCATTTGGTGGAACTCCAGGAAATGAGAGAATATTTATTGAAGAAGATTTTTCCAAAGTGACCATTCGCCACCATGCTATTGACAAAACCTACCGTAGTGGTTCTCTCTTTCCGGATCAAGGTTTCCTAGCCGTTGAAGCTGTGATTTCAGAAGTGGAAGTCTGGGGACTTGGAGGGGAAGTAGCAAAGAAAGTGCAAAGCTCGTACAAAAGGAGAGAAGAACTCTTCAATGAACAAAGACGAAAAGTTGACTTGAAAACATTTGCGAATTGGGAAGATTCTCCTGAGAAAATGATGATGGACATGATGTCAAATCCAAATGCTGTCCAAAGGGAAGACCGCTGA 1605 0.4411 MGASQSTEPAVSAEQREAESVAASTGTLPLLHKAFSNLSNPQTNAVPFENLPQCFGFAREDRTYSGNSVPASFPVLLDHLGSSIVDQFFVPGKGGIDWLQFVNGFNKCCARVSASVSLNMLFRVFAAMALKANVPLHLVFESEDDECKINGHLLPSDVLLLLYVCWVMSWDCRNLGNSERKGNVRLPDLSHLVLSAITSCSKVEGGFNVWDCDVSSLGVELPAGKFVTWVMSTVPCLPDCLRQYFHARIQMAGDQLEYLNSSTGDISSAAACDYILTQGRAWAISITQKSTVNDEISRVFLCSGSGMDKNLLYRSSTHGRGLNRFWSHVEGYKGPLLILIAASSGNAREGSSTDRKWVIGALTSQGLENKDTFYGASGCLYSISPVFHAFPPSGKEKNFVYSHLHPTGRVYQAHPKPVGVAFGGTPGNERIFIEEDFSKVTIRHHAIDKTYRSGSLFPDQGFLAVEAVISEVEVWGLGGEVAKKVQSSYKRREELFNEQRRKVDLKTFANWEDSPEKMMMDMMSNPNAVQREDR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1978 534 Pfam TLD 311 478 IPR006571 -
Ahy20g1978 534 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 521 - -
Ahy20g1978 534 SMART 109ultra 289 478 IPR006571 -
Ahy20g1978 534 ProSiteProfiles TLDc domain profile. 282 478 IPR006571 -
Ahy20g1978 534 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1978 Ahy-Chr20 111632293 111635508 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1978 - - adu:107470369 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1978 20 111632293 111635508 Ahy10g1541 10 89719768 89722897 hybridization