Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1912 ATGAACATCAACATGGCTCTCACCAATCTCCCATTCTGTTCTCCACCACATCTCCACCGCTGCACCTCACTCACTCTCACTCGCTCCACCACAAAACCCACTCTTTCCGTAACCAATTGCCTCTCCCTCCAAGAACCCTTTACTGCTTCAATATCTAAACTCAGCGTCGGTCAAGATTTGCCGCCAAATTACGGCGATTGGCTTCCCAAACCTGACCTCGATAATCGCAGAAGAGCCGGAATTCTTCTACATCCGACCTCGTTTCGGGGACCGTACGGCATCGGCGATCTCGGCCAAGAGGCATTTCGTTTCATTGATTGGCTCCATCAATCTGGTTGCTCCCTTTGGCAGGTGCTACCACTTGTGCCTCCTGGCAGAAAGGCTAACGAAGAAGGTTCCCCTTACTCCGGCCAGGATGCAAATTGTGGAAACACCTTGCTCATCTCACTGGAGGATCTTGTTAAGGATGGATTATTGGAAAAGCATGAGCTTCCAGAACCCATTCATGCTGAGCGGGTGAATTTTTCACTTGTTGCTGACCTTAAGGATCCCTTGTTAACTAAAGCTGCAGAGAGGCTGATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAGTTTTCACAGGGACCCTAACATATCAAGCTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATGATAGTTTAAATACAATCAGCTGGTACAATTGGCCTGAACCTCTAAGAAACCGCCATCTTGCAGCTCTAGAAGAGATTTATCAACAAAAAAGACACTTCATAAATGTGTTTATTGCTCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTCGTAACTATGCAGAGAGTAGGGGAATTAGGATAATGGGAGACATGCCCATATATGTTGGTTACCATAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTATACTGAACAGGAAAGGTTTTCCTCTTTTAGTTAGTGGAGTTCCACCCGATGCATTCAGTGAAACTGGTCAGCTGTGGGGCAGTCCTTTGTATGATTGGAATGCCATGGAGAAAGAAGGATACTCGTGGTGGATACGCCGCATACGCCGTGCACAGAATTTATATGATGAATTTAGGATCGATCACTTTAGAGGACTTGCTGGATTTTGGGCTGTTTCCTCTGCAGCAAAGGTAGCTATGGTTGGAAAGTGGAAGGTAGGACCTGGGATATCCTTCTTTGATGCCATTTTCAGAGCAGTTGGAAGAATTAATATCACAGCAGAAGACTTGGGAGTTATCACAGAGGATGTAGTTCAACTAAGAAAATCCATTGGAGCACCTGGAATGGCAGTCCTCCAGTTTGGGTTTGGAAGTGATGCTGCCAACCCACATTTGCCTCATAATCATGAGTGCAATCAAGTTGTATATACAGGGACTCACGATAATGACACAATCCAAGGTTGGTGGGAAGCTTTGAAGCAAGGAGAAAAATCAAATGTGATAAATTATCTCTCACTAAGTGAGCCAGATGACATTTCTTGGGCACTAATCAAGACAGCACTGGCTTCTGTTGCTCAAACAACAATAATACCTATGCAAGATGTTCTTGGACTGGGGAGTTCTGCCAGGATGAACATTCCTGCCACTCAGTTTGGAAACTGGGGTTGGAGGATTGAAAGTTCTGTGAGCTTTGATAGCTTGGAGAGAGAAGCAGCTAGACTTAAAGAGATGCTTTCAATGTACGGCCGATGTTGA 1728 0.4502 MNINMALTNLPFCSPPHLHRCTSLTLTRSTTKPTLSVTNCLSLQEPFTASISKLSVGQDLPPNYGDWLPKPDLDNRRRAGILLHPTSFRGPYGIGDLGQEAFRFIDWLHQSGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEDLVKDGLLEKHELPEPIHAERVNFSLVADLKDPLLTKAAERLISSEGELKTQLESFHRDPNISSWLEDAAYFAAIDDSLNTISWYNWPEPLRNRHLAALEEIYQQKRHFINVFIAQQFLFQRQWQKVRNYAESRGIRIMGDMPIYVGYHSADVWANKNQFILNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWNAMEKEGYSWWIRRIRRAQNLYDEFRIDHFRGLAGFWAVSSAAKVAMVGKWKVGPGISFFDAIFRAVGRINITAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDAANPHLPHNHECNQVVYTGTHDNDTIQGWWEALKQGEKSNVINYLSLSEPDDISWALIKTALASVAQTTIIPMQDVLGLGSSARMNIPATQFGNWGWRIESSVSFDSLEREAARLKEMLSMYGRC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1912 575 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 43 574 IPR003385 GO:0004134|GO:0005975
Ahy20g1912 575 SUPERFAMILY (Trans)glycosidases 58 574 IPR017853 -
Ahy20g1912 575 TIGRFAM malQ: 4-alpha-glucanotransferase 73 561 IPR003385 GO:0004134|GO:0005975
Ahy20g1912 575 Pfam 4-alpha-glucanotransferase 83 550 IPR003385 GO:0004134|GO:0005975
Ahy20g1912 575 Gene3D Glycosidases 74 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1912 Ahy-Chr20 106686595 106692412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1912 25 574 Glycoside Hydrolase AT5G64860 69.818 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1912 K00705 - gmx:100795007 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1912 20 106686595 106692412 Ahy10g1491 10 85154665 85159413 hybridization