Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1899 ATGAATCTTAATTATTGCTTCCATCACAACAAAATTTTCTGTGACATGGAGGACAAAAATAGTTACACTCAGGATGGCACGGTTGATCTTAGAGGAAAACGAGTGCTCTCTTCTACAACTGGGCAATGGAAAGCTTGCAGATATATTCTTGCATACCAAGCATTGGAAAGATTTGCCTACTTTGGAGTAGCTGCTAATTTGGTGAATTATATGACAAGCCAACTCCACAAAGACTTGGTATCTTCAATAAGCGATGTGAATAACTGGTCAGGAGTAGCATGGATAACCCCAATTCTTGGTGCCTACATAGCTGATTCTCATTACATGGGGCGCTTTTGGACGGTCACTCTTTCACTCCTCATATATACCATAGGAGTTGTGCTTCTAGTCCTGACTACTTGGCTGAAAAGCTTGAGACCAAAGTGGAACAGCAATGCAAGCAACTTACAACTATCACTCTTCAATCTATCACTATACACTATAGCAATTGGAAGTGGTGCATTGAAGCCAAACATGTCAACTTTTGGTGCTGATCAATTTGATGATTTCAACTCAAAAGAGAAGCAGCTCAAAGGTTCATTCTTCAATTGGTGGACTTTCCACACATCATGTGGTGCTTTAGTTGCTACTTTGGCTGTTGTCTACATTCAAGAGAAGGTTAGATGGGAATGTGGTTATGCCTTGTGTGCTATTGGATTTCTATTTTCGGTTATTGTTTTCTTTCTGGGCACCCCATTATATAGGCACAAATCTAGAAATGCCAAGACTTGCCATGAAAAGGATTTCATTAGGGTCATTCTTCTTGCCTTCACAAATAGAAACCTTCAGCTTCCTACTTCTCCTTCAGAGCTCCATGAATTTGACTTGCAACATTATGTAAATAGTGGAACGAGGCAAATCCATCACACTCCCCGTTTCAGGTTCTTAGACAAGGCAGCAATAAAAGAGAGCAAAAATGCAGCATGCACAGTGACTCAAGTAGAAGGAACAAAGCTTGTTCTAGGAATGCTTGAAATATGGCTACTAATGCTAATTCCAAGCAATTTCCTTGCAGTAGAGATGACCATTTTTGTCAAACAAGGTACAACATTGGACAGAAGCCTTGGCCAGAGTTTTCGCATTCCGGCCGCCTCCCTCTGGAGCTTCCTAGTTGTCACAATGCTCATTTCCCTCCCAATCTACGACACTTACTTCGTACCGTTCATGCGCCGGAGAACCGGAAACATGAGAGGAATCACGTTGCTACAGAGGCTGGGCGCAGGAATCGCTGTGCAGGCGGTAGCAATGGCTGTGTGCTGCGCCGTAGAGATTCAAAGAATGAATGTGATAGCACAGCAACATATAAGTGGCCATGAAAAGATAGTTCCTATGAGCATATTCTGGTTGTTGCCACAGTATATTTTACTTGGCATAGCAGACACATTTCTTATGAGTGGTTTGTTGGAATTCTTCTATGATCAATCCCCTGAAGAAATGAAGGGTCTTGGAACAACGTTTTTCACAAGCTCTGTTGCTGCTGGGAGCTTTTTTTGCACGTTTTTGGTGACTATGACGGATAACGTTACTGGGAAAGTCAGTGGTAAGAGATGGATAGGGAACAACCTTAATGATTCTCACCTAGATTATTATTATGCCTTTCTTTTTGTCATATCTCTGCTTAATTTTGGGGCCTTTCTTTGGGCATCAAGTGGATACACTTACAAGAAAGAGAATACCTTAGAATTAGAGAGTCCCTTATGA 1740 0.4161 MNLNYCFHHNKIFCDMEDKNSYTQDGTVDLRGKRVLSSTTGQWKACRYILAYQALERFAYFGVAANLVNYMTSQLHKDLVSSISDVNNWSGVAWITPILGAYIADSHYMGRFWTVTLSLLIYTIGVVLLVLTTWLKSLRPKWNSNASNLQLSLFNLSLYTIAIGSGALKPNMSTFGADQFDDFNSKEKQLKGSFFNWWTFHTSCGALVATLAVVYIQEKVRWECGYALCAIGFLFSVIVFFLGTPLYRHKSRNAKTCHEKDFIRVILLAFTNRNLQLPTSPSELHEFDLQHYVNSGTRQIHHTPRFRFLDKAAIKESKNAACTVTQVEGTKLVLGMLEIWLLMLIPSNFLAVEMTIFVKQGTTLDRSLGQSFRIPAASLWSFLVVTMLISLPIYDTYFVPFMRRRTGNMRGITLLQRLGAGIAVQAVAMAVCCAVEIQRMNVIAQQHISGHEKIVPMSIFWLLPQYILLGIADTFLMSGLLEFFYDQSPEEMKGLGTTFFTSSVAAGSFFCTFLVTMTDNVTGKVSGKRWIGNNLNDSHLDYYYAFLFVISLLNFGAFLWASSGYTYKKENTLELESPL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1899 579 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 28 572 - -
Ahy20g1899 579 SUPERFAMILY MFS general substrate transporter 38 561 IPR036259 -
Ahy20g1899 579 Pfam POT family 112 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy20g1899 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 28 572 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy20g1899 579 Gene3D MFS general substrate transporter like domains 14 574 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1899 Ahy-Chr20 105695898 105698917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1899 16 571 Organic Solute Cotransporters AT2G40460 58.750 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1899 - - gmx:100805054 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1899 20 105695898 105698917 Ahy20g1899 20 105695898 105698917 ECH
Ahy20g1899 20 105695898 105698917 Ahy10g1476 10 84145274 84147972 hybridization