Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1893 ATGGGTGAGGGAGAACGATTTCAACTTGGGACTGTCGGCGCGTTGACTCTTTCTGTGGTGTCATCGGTGTCGATTGTGATTTGCAATAAGGCACTGATGAGCTCATTGCATTTCATTTTCGCTACAACTTTGACAAGTTGGCATCTGCTTGTCACATTCTGTTCACTTCATGTGGCACTCAGAATGCGATTCTTTGAGCATAAACCTTTCGAGCAGAAAGCCGTAATGGGATTTGGGATTTTAAATGGAATCTCAATTGGACTCCTAAACTTGAGTTTAGGGTTCAATTCTGTTGGTTTTTATCAGATGACCAAACTGGCAATCATTCCATGTACTGTAATGTTGGAGACCATTTTTCTTGGGAAGAGATTCAGTAAAAGAATTCAGTTTGCCCTAGCTATCCTCCTTCTGGGTGTTGGGATTGCAACTGTCACAGATTTGCAGCTCAATGCTATGGGCTCTTTTTTGTCGTTGCTAGCAGTGATTACAACATGTGTTGCTCAGATTATGACAAATACTATTCAGAAGAAGTTCAAGGTTTCTTCCACCCAACTTCTGTATCAATCATGTCCATACCAAGCAGCAACTCTGTTAGTCTCTGGTCCATTTTTGGATAAATTTTTGACCAACCAAAATGTTTTTGCTTTCAACTATACAACACAAGTGACGGTCTTCATTGTTCTGTCATGCCTCATCTCCATCTCGGTCAATTTTAGTACATTTCTTGTTATCGGAAAGACATCTCCGGTCACCTATCAGGTACTTGGACACCTGAAGACTTGCCTTGTATTGGCATTTGGGTATATTTTACTCCATGACCCATTCAGCTGGAGGAACATACTCGGTATTCTCATCGCCATGGTTGGAATGATTCTATACTCTTATTATTGCACTCTTGAGAATCAACAAAAAGCTGTGGAAACTTCAGTACAAACCTCCCAGGCAAGAGAAGCTGAATCTGATCCTCTTATTAATGTGGAGAATGGAAGTTCAGTTGTGAGTGATTCAGTTGTGCAAATGTCCCCTCTATGGAGCAAAGACAAAGACTAA 1050 0.4105 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALRMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVMLETIFLGKRFSKRIQFALAILLLGVGIATVTDLQLNAMGSFLSLLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLVSGPFLDKFLTNQNVFAFNYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILIAMVGMILYSYYCTLENQQKAVETSVQTSQAREAESDPLINVENGSSVVSDSVVQMSPLWSKDKD* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1893 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 294 - -
Ahy20g1893 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
Ahy20g1893 349 PANTHER SOLUTE CARRIER FAMILY 35 3 324 - -
Ahy20g1893 349 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 3 324 - -
Ahy20g1893 349 Pfam Triose-phosphate Transporter family 20 294 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1893 Ahy-Chr20 105133247 105137008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1893 1 325 Organic Solute Cotransporters AT1G21870 24.340 3.01e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1893 K15285 - gmx:100786018 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1893 20 105133247 105137008 Ahy10g1471 10 83534904 83538918 hybridization
Ahy13g3124 13 125699075 125703271 Ahy20g1893 20 105133247 105137008 PCT
Ahy3g2798 3 122519284 122523376 Ahy20g1893 20 105133247 105137008 PCT
Ahy20g1893 20 105133247 105137008 Ahy13g3124 13 125699075 125703271 PCT
Ahy20g1893 20 105133247 105137008 Ahy3g2798 3 122519284 122523376 PCT