Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1887 ATGTTGACGGCCGCTATTCTCACTCCTCTATCCTCATCTCATTTTCGCATTTCACGTAACTCAATTCCTCAAAATCCGTGTCGTAGCTCCAAAGTCAACACCTTTGCGCCGAATTTCAGGGGTGGCTGTAAATGTGAGACTCAAACCGAAAGGGGGTTAGAGTTTGAAATTGGCGGTGCATTCTACCGGCAAGAGAGCGCCTCCGGGAGGGACCTCGGAGTACTCGCCGCTTTCTTGCATAAGAAGTCCAATGGGAGCTTGCGCGTGCTTGATGCGCTTTGCGGGTGCGGTGTTCGTTCGCTTCGGTACTTGGTTGAAGCTGAAGCTGATTTTGTTGCTGCTAATGATGCGAATGATAGCTATGGAAGCACGATTGCAGAGAATTTGTCGAGGGTGAAGAAGGGTTCTTGTGATGAGAGTGGAGAGAGATGGAAGGTTACTCATTTGGAGGCTAATCGTGTGATGGTGGATTATTATCTTCAAAAGAGTTTCTTTGATTTCATTGATGTTGATTCTTTTGGGAGTGATTCATCTTTCTTGAGGTCTGCAATGAATGCTTTGAGGCTGGGTGGTTTGCTCTATGTGACTTCTACTGATGGATACTCTTCTGGTGGACACCGTCCCCATCATTCTTTAGCTGCATATGGAGCCTATGTGCGCCCTATGCCATATTCGAATGAGGTTGGTTTGCGAATGCTTATAGGTGGAGCTGCCAGGGAGGCTGCAGTGTTAGGGTATCATATTACTCCCTTGTTTTCGTACTATGCATATCACGGACCTGTTTTCAGAGTCTTACTCAGATTAAATCGTGGCAAGATTCATGACAGTAGGCATTATGGCTATATTGGTTACTGCCACAAATGTGGAAATTCTCATGAATATTCTTGGGATCAACTTGGTCAGATTAGTTGCTCTTGCAGTATGCCAATGGTTTCAAACTCCCTTGTGGTGTCCGGACCGCTTTGGACTGGACCTCTTCACGATGCTGCATATCTTGCGGACATGCTAAATCTAGCCAAGGAGTGGGAATGGGTTGAATGTGACAGTAAAAACAGTCTTGGAAAGCTTATAAACCGAATGATTGATGAAAGTGACCCTAAGTTGCCATTTGGGTATATCAAGTTGGATGAGATGGCAAGCCGCGCAAAAATTAATTCTCCATCACTAAAGGCCTTGATGAATGCCATGCACCAGGAGGGTTATGCTGCAAGCAGGTCTCACATAGCCACAAATGCAATCAAGACCAATTGCCCCATGACAGAATGCATTAGGATTGCAAAAGAACTATTACAAGTTCCTGTTTCATAA 1308 0.4526 MLTAAILTPLSSSHFRISRNSIPQNPCRSSKVNTFAPNFRGGCKCETQTERGLEFEIGGAFYRQESASGRDLGVLAAFLHKKSNGSLRVLDALCGCGVRSLRYLVEAEADFVAANDANDSYGSTIAENLSRVKKGSCDESGERWKVTHLEANRVMVDYYLQKSFFDFIDVDSFGSDSSFLRSAMNALRLGGLLYVTSTDGYSSGGHRPHHSLAAYGAYVRPMPYSNEVGLRMLIGGAAREAAVLGYHITPLFSYYAYHGPVFRVLLRLNRGKIHDSRHYGYIGYCHKCGNSHEYSWDQLGQISCSCSMPMVSNSLVVSGPLWTGPLHDAAYLADMLNLAKEWEWVECDSKNSLGKLINRMIDESDPKLPFGYIKLDEMASRAKINSPSLKALMNAMHQEGYAASRSHIATNAIKTNCPMTECIRIAKELLQVPVS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1887 435 Gene3D Vaccinia Virus protein VP39 41 365 IPR029063 -
Ahy20g1887 435 ProSiteProfiles Trm1 methyltransferase domain profile. 46 426 IPR002905 GO:0003723|GO:0004809|GO:0008033
Ahy20g1887 435 PANTHER TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE 11 431 - -
Ahy20g1887 435 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 11 431 IPR002905 GO:0003723|GO:0004809|GO:0008033
Ahy20g1887 435 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 49 427 IPR029063 -
Ahy20g1887 435 Gene3D - 369 429 IPR042296 -
Ahy20g1887 435 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 60 425 IPR002905 GO:0003723|GO:0004809|GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1887 Ahy-Chr20 104738614 104741366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1887 K00555 - gmx:100788340 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1887 20 104738614 104741366 Ahy20g1887 20 104738614 104741366 ECH
Ahy20g1887 20 104738614 104741366 Ahy10g1466 10 83273822 83277739 hybridization