Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1871 ATGGCAAGTGAAACGGTAATGGTTGATGAAATCTCCTATCCTTCCACGATCACTACTACCAAGCCCCTGTCTCTTCTTGGTCATGGAATCAAGGACATGGAGATCCATTTCCTCCAAGTGAAGTTCTATACAATCGGGGTCTATTTGGACCCTGAAATAGTGAACCACTTGACACAGTGGAAGGGTACACCCCCAAAGGAGCTTGAAGAGAAAGAAGAATTCTTTGATGGAGTGATTGCAGCTCCAGTGGAGAAGGTGATTAGGCTTGTGGTGATCAAAGAGATCAAGGGAGCACAGTATGGGGTTCAGATTGAGACTGCTGTGAGGGACCGTTTGGCTGCTGATGACAAATACGAGGATGAAGAAGAAGCTGAATTGGAAAAGATTGTTGAGTTCTTCCAATCTAAGTACTTCAAGAAGAATTCAGTCATCACATATCATTTCCCAGCGAACTCTCCAACTGCGGAGATTGTGGTGTCTTTGGAGGGGAAGGAAGATTCAAAGTTTGTGGTAGAGAATGCCAATGTGGTGGAGACCATCAAAAAATGGTACCTTGGTGGCTCAAGTGCTATCTCACCCTCAACCATTTCATCTTTGGCTACCACCTTCTCTCAGGAATTGTCCAAGTGA 630 0.4492 MASETVMVDEISYPSTITTTKPLSLLGHGIKDMEIHFLQVKFYTIGVYLDPEIVNHLTQWKGTPPKELEEKEEFFDGVIAAPVEKVIRLVVIKEIKGAQYGVQIETAVRDRLAADDKYEDEEEAELEKIVEFFQSKYFKKNSVITYHFPANSPTAEIVVSLEGKEDSKFVVENANVVETIKKWYLGGSSAISPSTISSLATTFSQELSK* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1871 209 Gene3D - 53 205 IPR016089 -
Ahy20g1871 209 SUPERFAMILY Chalcone isomerase 5 208 IPR036298 GO:0016872
Ahy20g1871 209 Gene3D - 13 184 IPR016088 -
Ahy20g1871 209 Pfam Chalcone-flavanone isomerase 8 205 IPR016087 GO:0016872
Ahy20g1871 209 PANTHER CHALCONE--FLAVONONE ISOMERASE 3-RELATED 1 209 IPR044191 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1871 Ahy-Chr20 103594697 103596118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1871 K01859 - gmx:778027 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1871 20 103594697 103596118 Ahy10g1456 10 81630974 81632322 hybridization