Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1676 ATGGCCGATGATCTATCTTCCATCGCCAAGGGTTTGAAAAATACTACTTTGATATGGAGGATGGTCGTGTTAACCCTTGCTATGGTCTGTGGTGTGTATATATGTTCTATTTGTCTAAAGCAAATAGGCATAGGCACCGCCAGCAAGATTGGATTTTTAGATATCAAGATTGTTGACAAGCCGTGCCCGGAACCTAACATTGAACCTTGGGAGATTCCTTATGTTCACTACCCAAATCCCAAAACTTACAGCAGGGAGGAATGCGCTTGCAGCCCTGTGCGGTATTTCGCTATTCTGTCGATGCAGAGATCTGGGAGTGGATGGTTCGAGACATTTTTAAACAGTCATGCTAACATAAGCTCAAATGGGGAAATATTTTCAGTTAAGGCGAGGAGGAGTAATATGTCCACAATAACGGAGACGCTGGATACCATTTATAATCTAGACTGGGTCAGTAGCGCTTCAAAAAACGAGTGCACAGCTGCTGTTGGCTTGAAGTGGATGCTTAATCAGGGATTGATGCAGAATCATGAACAAATTGCTGAGTACTTCAGAATACATGGTGTTTCAGTCATATTTCTTTTCAGAAGGAATCTTTTGCGCCGGATGATTTCTGTAATTGCAAATGAGTACGATCGGAGTGCTAAGACATTAAATGGAACTCATAAATCCCATGTTCATTCGCCCAAGGAGGCTGAAATACTTGCACAATACAAACCCAAACTCAATTCATCAACATTGATACAAAATTTGAAGCAAGTAAGCGAAACCACCAAGAAGGCTCTGGAGTATTTCAAGAGCACCAGACACATTCTCGTATATTACGAAGATGTCGTCAAGAACCGGACTAAATTAATGGATGTTCAGGATTTTCTGAAGGTTCCTCGCATGGAACTAAAGACACGTCAGGTTAAGATACATAAAGGAACCTTATCCAGCCAAGTCAAAAATTGGAACGATGTAGAGAAGGCACTCACCGGAACACCATTCGAGAATTTCCTCCATGAAGATTACCGTAGATAA 1023 0.4164 MADDLSSIAKGLKNTTLIWRMVVLTLAMVCGVYICSICLKQIGIGTASKIGFLDIKIVDKPCPEPNIEPWEIPYVHYPNPKTYSREECACSPVRYFAILSMQRSGSGWFETFLNSHANISSNGEIFSVKARRSNMSTITETLDTIYNLDWVSSASKNECTAAVGLKWMLNQGLMQNHEQIAEYFRIHGVSVIFLFRRNLLRRMISVIANEYDRSAKTLNGTHKSHVHSPKEAEILAQYKPKLNSSTLIQNLKQVSETTKKALEYFKSTRHILVYYEDVVKNRTKLMDVQDFLKVPRMELKTRQVKIHKGTLSSQVKNWNDVEKALTGTPFENFLHEDYRR* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1676 340 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 8 338 - -
Ahy20g1676 340 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 8 338 - -
Ahy20g1676 340 Gene3D - 94 323 IPR027417 -
Ahy20g1676 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1676 Ahy-Chr20 73579350 73582632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1676 - - gmx:100799665 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1676 20 73579350 73582632 Ahy20g1676 20 73579350 73582632 ECH
Ahy20g1676 20 73579350 73582632 Ahy15g0664 15 8823706 8826826 ECH
Ahy17g2497 17 119315944 119317799 Ahy20g1676 20 73579350 73582632 ECH
Ahy16g3564 16 153250148 153255452 Ahy20g1676 20 73579350 73582632 ECH