Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1533 ATGAGCTCCACTTCATTCACTTCAGTTAGCTTCAACACCGCTTCCTCTTGGAACTTGAAGAGACGTGAAGGAGGGAAAGCATATGTCAGGTGTGGGAGCGCTGCTTCTTCCGAAAACACTGTTCGTGTTGGTGTTCTTGGAGCTAGTGGCTACACTGGTTCTGAGGTTCTTAGGCTTTTGGCGAATCATCCGCAATTCGGGGTTGCTCTATTGACTGCCGATAGGAAAGCTGGACAGCCGATTGCTTCCGTCTTCCCCCATTTGGCCACACAGAAATTGCCAGATTTGATTGCGGTCAAGGATGCAGATTTTTCTCATGTGGATGCTGTATTCTGTTGTTTGCCGCATGGAACCACTCAGGAAATAATTAGAGGCCTTCCCAATCACTTGAAGATTGTTGACCTTTCAGCAGATTTTCGTTTACGTGATATATCTGAGTATGAAGAGTGGTATGGCCAACCACACAGGGCACCGGAGTTGCAGAAAGAAGCTATATATGGATTAACAGAGATTTTAAGGGAGGAAATAAGGAATGCACGCTTAGTTGCTAATCCTGGTTGCTATCCAACATCCATTCAAATTCCCCTTGTCCCACTGATAAAGGCAAAGCTTATTGACATAAAAAATATTATTATTGATGCAAAATCTGGTGTGAGTGGAGCAGGGCGTAGTGTCAAAGAAAATTTATTGTACACAGAAGTAGCTGAAGGTATCAATTCTTATGGTGTTACCCGGCATCGCCATGTTCCAGAAACTGAACAAGGGCTATCTGATGCTGCACATTCTAAAGTAACCATCAGTTTTACCCCGCATCTGATGCCAATGATACGTGGTATGCAATCAACTATTTATGTGGAAATGGCTCCAGGAGTAAGCACTGAGGACTTGTACCAGCAACTCAAGCGCTCTTATGAAAATGAAGAATTTGCCGTACTGTTGGGGAATGGAGTAGTTCCCCGAACTCACAGCGTCAGAGGAACCAATTACTGTTTAATAAATGTTTTTCCTGACCGAATTCCCGGAAGAGCAATAATCATATCTGTGATTGATAATTTGGTGAAAGGAGCTTCAGGACAGGCTTTACAAAACCTTAATTTGATGATGGGGTTTCCAGAAAACCTAGGGCTGCATTATCAGTCTCTGTTTCCATAG 1152 0.4349 MSSTSFTSVSFNTASSWNLKRREGGKAYVRCGSAASSENTVRVGVLGASGYTGSEVLRLLANHPQFGVALLTADRKAGQPIASVFPHLATQKLPDLIAVKDADFSHVDAVFCCLPHGTTQEIIRGLPNHLKIVDLSADFRLRDISEYEEWYGQPHRAPELQKEAIYGLTEILREEIRNARLVANPGCYPTSIQIPLVPLIKAKLIDIKNIIIDAKSGVSGAGRSVKENLLYTEVAEGINSYGVTRHRHVPETEQGLSDAAHSKVTISFTPHLMPMIRGMQSTIYVEMAPGVSTEDLYQQLKRSYENEEFAVLLGNGVVPRTHSVRGTNYCLINVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLMMGFPENLGLHYQSLFP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1533 383 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 212 IPR036291 -
Ahy20g1533 383 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 2 383 - -
Ahy20g1533 383 TIGRFAM argC: N-acetyl-gamma-glutamyl-phosphate reductase 41 383 IPR000706 GO:0003942|GO:0006526
Ahy20g1533 383 Pfam Semialdehyde dehydrogenase, NAD binding domain 42 179 IPR000534 GO:0016620|GO:0051287
Ahy20g1533 383 Gene3D - 42 369 - -
Ahy20g1533 383 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED 2 383 - -
Ahy20g1533 383 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 187 350 - -
Ahy20g1533 383 SMART Semialdhyde_dh_3 42 179 IPR000534 GO:0016620|GO:0051287
Ahy20g1533 383 Pfam Semialdehyde dehydrogenase, dimerisation domain 196 354 IPR012280 GO:0008652|GO:0016620|GO:0046983
Ahy20g1533 383 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 182 198 IPR023013 GO:0003942
Ahy20g1533 383 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 41 377 IPR000706 GO:0003942|GO:0006526
Ahy20g1533 383 Gene3D Dihydrodipicolinate Reductase; domain 2 185 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1533 Ahy-Chr20 45654801 45658397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1533 K00145 - gmx:100801527 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1533 20 45654801 45658397 Ahy20g1533 20 45654801 45658397 ECH