Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1516 ATGGGTGACTTGGGAGAGTTTGATTCATCATTCATTCAGGCCTTAGAACACAGGCCAAAACCCAATGCTACTGAAGCACAAGGGATACCCTTGATTGATCTGTCACCCATTAGTTGCCATGAAGATGTTGAAACAAACTCAGAAACTGACCCTGCTTCCATTGAGGAGCTTGTCAAACAGGTTGGAAGTGCCTGCAAGAACTGGGGTTTCTTCCAGGTGATCAATCATGGGGTGCCTCTTGATAGGCGCCAGAGGATCGAAGCGGCGGCGAGGGAGTTCTTTGCGCAGAGTTTGGAGGAGAAGAGGAAGGTGAGGAGGGATGAGGTGAAGATAATGGGATACTATGATAGAGAACACACAAAGAATGTTAGGGATTGGAAGGAAGTGTTTGATTTTGGTGTTGAGGATCCAACTTTGGTTGCAGCCTCAACTGATCCTGATGATGATAGTGTTGCTTATTGGACTAATCAGTGGCCTGAATACCCACCCAAGTTCAGGGAAACTTGCGAAGAATACACTAGGGATGTTGGCAAGTTGATAATGAAGTTGATGGAGCTTATAGCACTAAGCCTAGGCTTGAAAGCAAAGAGGTTCCATGAATATTTCAAAGATCAAACAAGTACCATTCGACTCAACTACTACCCACCATGCCCTTCCCCTGAACTCGCTCTTGGGGTTGGACGCCACAGGGACAATGGAGTCTTAACAGTGCTATCTCAAGATGAAGTTGGAGGTCTTCAAGTTAAGCGACGAACAGATGGAGAGTGGATTGGAGTGAAGCCCACACCAGGTGCCTTTATCATCAATGTTGGTGACATAATGCAGGTGTGGACCAATGAGGCTTACAGAAGTGCAGAGCACAGGGTGGTAGTGAATTCTGTGAAGGAGAGGCTTTCAATTCCATTCTTCCTCAACCCAGCTCACTACACTGAGGTGAAACCACTTGAGGAGCTCATAGATGAGGAACACCCTCCCAAGTATAGGCCATATGTTTGGGGCAAATTTCAAGTTATTAGAAAGCGCAGTAACTTCATCAAACTCAATGTTGAAAACATCCAAATTGATGATTTCAGGATAGCACATTAA 1086 0.4549 MGDLGEFDSSFIQALEHRPKPNATEAQGIPLIDLSPISCHEDVETNSETDPASIEELVKQVGSACKNWGFFQVINHGVPLDRRQRIEAAAREFFAQSLEEKRKVRRDEVKIMGYYDREHTKNVRDWKEVFDFGVEDPTLVAASTDPDDDSVAYWTNQWPEYPPKFRETCEEYTRDVGKLIMKLMELIALSLGLKAKRFHEYFKDQTSTIRLNYYPPCPSPELALGVGRHRDNGVLTVLSQDEVGGLQVKRRTDGEWIGVKPTPGAFIINVGDIMQVWTNEAYRSAEHRVVVNSVKERLSIPFFLNPAHYTEVKPLEELIDEEHPPKYRPYVWGKFQVIRKRSNFIKLNVENIQIDDFRIAH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1516 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 306 IPR005123 -
Ahy20g1516 361 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 5 352 - -
Ahy20g1516 361 Gene3D - 2 343 IPR027443 -
Ahy20g1516 361 SUPERFAMILY Clavaminate synthase-like 12 341 - -
Ahy20g1516 361 PRINTS Isopenicillin N synthase signature 294 312 - -
Ahy20g1516 361 PRINTS Isopenicillin N synthase signature 61 78 - -
Ahy20g1516 361 PRINTS Isopenicillin N synthase signature 229 250 - -
Ahy20g1516 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 29 160 IPR026992 -
Ahy20g1516 361 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 5 352 - -
Ahy20g1516 361 Pfam 2OG-Fe(II) oxygenase superfamily 207 306 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1516 Ahy-Chr20 43785742 43788274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1516 29 328 Glycosyltransferase AT5G59530 36.482 3.93e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1516 - - qsu:112029575 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1516 20 43785742 43788274 Ahy20g1516 20 43785742 43788274 ECH