Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1492 ATGGCTCTGAGGCTGAACCCTAACCCTTCACAGAAGCTCTTTCTCTCTCCTTCTTCATCATCTTCTTCTTCTTCATCGTTCTCGCTTCCTCAAATGGCTAGCCTCAGATCTCCAAGGTTCCGCATGGCCTCCACCCTCCGCACTGGTTCCAAAGAGGTTGAAAATCTCAAGAAGCCTTTCACGCCTCCCCGAGAGGTACATGTTCAAGTAACCCACTCCATGCCGCCCCAGAAGATTGAGATTTTCAAATCGTTAGAGGGTTGGGCTGAGGAGAACATTTTGACTCTCCTCAAACCCGTAGAGAAGTGCTGGCAGCCACAGGACTATTTACCAGAACCTTCAGAGGATGGATTTGAGGAGCAAGTGAGGGAACTGAGAGCAAGGGCAAAAGAGCTTCCTGATGATTACTTTGTTGTTCTGGTCGGAGACATGATCACTGAAGAAGCCCTTCCTACTTACCAGACAATGCTTAATACTCTGGACGGGGTTCGAGATGAAACAGGGGCCAGCCTTACTTCCTGGGCAGTTTGGACAAGGGCATGGACTGCGGAGGAAAATAGACACGGTGACCTTCTTAACAAGTATCTTTACTTGTCTGGCCGCGTTGACTTGAGGCAAATTGAGAAGACAATTCAGTACTTGATTGGTTCTGGAATGGATCCTCGGACCGAGAACAGCCCATACCTTGGTTTCATTTATACTTCATTTCAAGAGAGGGCCACCTTTATATCCCATGGGAACACAGCTAGGCTGGCAAAGGAACATGGGGATATGAAGTTGGCACAAATATGTGGTATGATTGCCTCAGATGAGAAACGCCATGAGACTGCGTACACAAAGATAGTGGAGAAGCTGTTTGAGATCGATCCTGATGGAACTGTAATGGCTTTTGCTGACATGATGAGGAAGAAAATAGCTATGCCGGCACACTTGATGTATGATGGCCGTGATGACAACCTGTTCGAAAACTATTCTGCCGTCGCTCAGCGCATCGGAGTCTACACTGCCAAGGACTATGCTGATATCCTTGAATTTCTTGTGGGGAGGTGGAAGGTGGCAGACCTAACCGGACTCTCTGGTGAGGGAAGGAAAGCTCAGGATTATGTTTGTGGGCTGCCGCCAAGAATCCGAAGGCTGGAGGAGAGAGCTCAAGGAAGAGCCAAGGAATCCCCAAGACTTAAATTCAGTTGGATTTACGATAGGGAAGTGCAACTCTAA 1218 0.4819 MALRLNPNPSQKLFLSPSSSSSSSSSFSLPQMASLRSPRFRMASTLRTGSKEVENLKKPFTPPREVHVQVTHSMPPQKIEIFKSLEGWAEENILTLLKPVEKCWQPQDYLPEPSEDGFEEQVRELRARAKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAVWTRAWTAEENRHGDLLNKYLYLSGRVDLRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGMIASDEKRHETAYTKIVEKLFEIDPDGTVMAFADMMRKKIAMPAHLMYDGRDDNLFENYSAVAQRIGVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLPPRIRRLEERAQGRAKESPRLKFSWIYDREVQL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1492 405 PIRSF Dlt9_acylACP_des 31 405 IPR005067 GO:0006631|GO:0045300
Ahy20g1492 405 Gene3D Ribonucleotide Reductase, subunit A 60 405 IPR012348 GO:0016491
Ahy20g1492 405 MobiDBLite consensus disorder prediction 1 30 - -
Ahy20g1492 405 CDD Acyl_ACP_Desat 77 383 IPR005067 GO:0006631|GO:0045300
Ahy20g1492 405 SUPERFAMILY Ferritin-like 63 404 IPR009078 -
Ahy20g1492 405 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 32 405 IPR005067 GO:0006631|GO:0045300
Ahy20g1492 405 Pfam Fatty acid desaturase 78 398 IPR005067 GO:0006631|GO:0045300
Ahy20g1492 405 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 32 405 - -
Ahy20g1492 405 MobiDBLite consensus disorder prediction 9 30 - -
Ahy20g1492 405 ProSitePatterns Fatty acid desaturases family 2 signature. 325 344 IPR005803 GO:0006633|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1492 Ahy-Chr20 42147002 42150781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1492 1 405 Acyl Lipid Metabolism Gene Families AT2G43710 79.707 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1492 K03921 - gmx:547808 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1492 20 42147002 42150781 Ahy10g1109 10 28133293 28134148 hybridization