Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1483 ATGAGGATAATGGTTACGTCATTGTTCATCGCAATATTCATCACAATGTTCATCATTTCCCTAACCGTTTCTGTTCAATCTTCTCCTTCCTCACAACCGCCGCCTGTTTCCGTTAACCATAACAACTTTGACAATGACATCAATCTCTCAGGTGACGCTCACGCCGTCAAAGACCGGGTGAGTCTCACGCGCCCCTCACAGTTCAGCTCCGGCCTCCTTCTCCGAAACACCTCAATCACATTCTCCTCTGCCAGCGCCAACACCACCGCCAATACAACCGGCACCTCCCTCTCCGTCGAATTCTCATTCTCAATCTCCCCCGCCGCCGCCTCCGACGATGGCGGTAGCGGTTTCGTCCTTATCCTCTTCCCTGGCGACTTCGAGAATGTATTCTCGGCTAACTACTCATTCGGCATCTCAAAAGAATACAGCAAAAACTATGTCGCCGTCGAATTCGACACCTCGCAAGATGACGAGTTCAACGATCCAAACGCGAACCACGTCGGAATAGACGTCGGAAGCCTCATCTCCGTCGCAATCGCGAATGTCTCCGACTCAGACATTGTCCTCAACAACGGCGAGAAGCTGAAAGCTTGGGTTGATTACGTGGCAAGTTCGAAGAATCTCGAGGTTCGGTTATGCAAGTCCAGTGAAGACCGCCCTAACGATCCGATCGTTTCGCACAAAATCGATTTGGCTAAACTCTGGGGAAACGAGCCCGTGTTCGTTGGTTTGAGTGCCTCGAACGACGCGGATTCCGTTCAGGTTGTTAGTGTGTACACGTGGAAGGTGGTGAGTTCTGGAGACGTGGCAGAACGTCAGGGTGCACGAAACGTGCCGGCTGAAGAAGAGAAGGGTAGTTTTGGAACTTTGTCGGTTCTTGCTGAGGTTATATTCGGAACTGTGTGTGTTGCGTTGGTTGCTTTTGTGGTACTGTTTCTGTGGGCCATATTCTTTCAGAAGCACGAGGAAGAACAGTCATTTGCGCTTGGGAAGAGAGAGAACCTTGAGTATGAGAGGATAGATGTTGCTGTGGATAAGCAAAGTACTGAAGAGATTGAGAGATTGAATTCGTAG 1077 0.5005 MRIMVTSLFIAIFITMFIISLTVSVQSSPSSQPPPVSVNHNNFDNDINLSGDAHAVKDRVSLTRPSQFSSGLLLRNTSITFSSASANTTANTTGTSLSVEFSFSISPAAASDDGGSGFVLILFPGDFENVFSANYSFGISKEYSKNYVAVEFDTSQDDEFNDPNANHVGIDVGSLISVAIANVSDSDIVLNNGEKLKAWVDYVASSKNLEVRLCKSSEDRPNDPIVSHKIDLAKLWGNEPVFVGLSASNDADSVQVVSVYTWKVVSSGDVAERQGARNVPAEEEKGSFGTLSVLAEVIFGTVCVALVAFVVLFLWAIFFQKHEEEQSFALGKRENLEYERIDVAVDKQSTEEIERLNS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1483 358 Gene3D - 36 279 - -
Ahy20g1483 358 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Ahy20g1483 358 Pfam Legume lectin domain 38 274 IPR001220 GO:0030246
Ahy20g1483 358 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 267 IPR013320 -
Ahy20g1483 358 CDD lectin_legume_LecRK_Arcelin_ConA 39 262 IPR001220 GO:0030246
Ahy20g1483 358 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 7 350 - -
Ahy20g1483 358 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 7 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1483 Ahy-Chr20 41782608 41784206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1483 31 279 Receptor kinase-like Gene Family AT5G55830 30.855 3.07e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1483 - - aip:107622087 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1483 20 41782608 41784206 Ahy20g1483 20 41782608 41784206 ECH
Ahy20g1483 20 41782608 41784206 Ahy10g1096 10 27691451 27692852 hybridization