Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1482 ATGCCTAACGTGGGAAGGAACGATAGTGAACATGAAAATCACAAGGATGGTAAAGGCAACGTTAAAGCACCGGAAACCGCGCACCAGATTAGTAGCGATTCATGGTTTCAAGTGGCTTTTGTCCTAACCACCGGAATCAACAGCGCTTATGTGCTGGGATATTCCGGCACCATCATGGTGCCGCTTGGTTGGGTTGGTGGCGTGGTTGGTCTAATCCTGGCCACCATGATTTCGCTCTATGCAAATGCTCTTGTTGCTATGCTCCATGAGTATGGGGGGAGAAGGCACATCAGATGTAGAGATCTTGCTGGATTCATATACGGAAGATGGGCGTATACTCTTACATGGGCTCTACAATACGTCAATCTTTTCATGATCAATACTGGCTATATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATCTTCTATTTTGGGATGATCACACAATGAAACTTCCATATTTTATTGCCATAGCTGGCTTTGTGTGTGCAATGTTTGCCTTTGGAATCCCTACTCTTTCAGCTCTTGGAGTTTGGCTGGGTTTTTCAACTCTCTTGAGTCTAGCTTATATTGTTATAGCATTTGTGCTGTCCCTTAAAGATGGATTGAATGCACCACCTAGAGATTTCAGTATTCCGGGCGATGGCGCCGGTAAAATATTTTCGATCATCGGAGCAAGCGCTAATCTCGTGTTCGCATATAACACTGGCATGCTTCCCGAAATACAGGCAACAATTAAGCAGCCAGTTGTGACGAACATGATGAAAGCCCTGTATTTTCAGTTCACAGTTGGTGTTCTTCCATTGTACCTGGTTACGTTTACAGGTTACTGGGCTTATGGAAATTCCACATCAGCATATTTGCTGAACAATGTGAATGGTCCTGTTTGGGTTAAAGCTGTAGCTAACATTACAGCTTTTCTTCAATCAGTCATTGCATTGCATATATTTGCTAGTCCTATGTATGAGTATGCGGACACCAAATATGGGATCACCGGAAGTGCCCTACAAATTAAGAACTTAACATTCAGGATTTTACTAAGAGGTGGCTACCTCACCTTCAATACATTTGTATCTGCTCTGCTACCATTTCTTGGAGATTTCATGAGCCTCACAGGTGCAATAAGCACATTCCCACTCACATTTATTCTTGCAAACCATATGTACCTAACGGCAAAGAAGGACAAACAATCATCCATGCAACAGCTTTGGCACTGGCTCAACATTGTTTTCTTTAGCATCATGTCTCTTGTAGCAACAGTTTCGGCCGTACGGCTTATCTCCGTAGACTCCAAAACATACCATCTTTTTGCTGATTTATGA 1326 0.4306 MPNVGRNDSEHENHKDGKGNVKAPETAHQISSDSWFQVAFVLTTGINSAYVLGYSGTIMVPLGWVGGVVGLILATMISLYANALVAMLHEYGGRRHIRCRDLAGFIYGRWAYTLTWALQYVNLFMINTGYIILAGSALKATYLLFWDDHTMKLPYFIAIAGFVCAMFAFGIPTLSALGVWLGFSTLLSLAYIVIAFVLSLKDGLNAPPRDFSIPGDGAGKIFSIIGASANLVFAYNTGMLPEIQATIKQPVVTNMMKALYFQFTVGVLPLYLVTFTGYWAYGNSTSAYLLNNVNGPVWVKAVANITAFLQSVIALHIFASPMYEYADTKYGITGSALQIKNLTFRILLRGGYLTFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLTAKKDKQSSMQQLWHWLNIVFFSIMSLVATVSAVRLISVDSKTYHLFADL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1482 441 MobiDBLite consensus disorder prediction 7 22 - -
Ahy20g1482 441 Pfam Transmembrane amino acid transporter protein 33 424 IPR013057 -
Ahy20g1482 441 PANTHER PROLINE TRANSPORTER 1 14 436 - -
Ahy20g1482 441 PANTHER OS05G0424000 PROTEIN-RELATED 14 436 - -
Ahy20g1482 441 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1482 Ahy-Chr20 41553823 41556817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1482 59 441 Organic Solute Cotransporters AT2G39890 74.413 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1482 - - gmx:100778997 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1482 20 41553823 41556817 Ahy20g1482 20 41553823 41556817 ECH
Ahy20g1482 20 41553823 41556817 Ahy10g1093 10 27614432 27617382 hybridization
Ahy20g1482 20 41553823 41556817 Ahy17g1005 17 12608814 12612071 PCT
Ahy20g1482 20 41553823 41556817 Ahy7g0828 7 10523622 10526916 PCT
Ahy17g1005 17 12608814 12612071 Ahy20g1482 20 41553823 41556817 PCT
Ahy7g0828 7 10523622 10526916 Ahy20g1482 20 41553823 41556817 PCT