Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1430 ATGAGGATCACTCTCGATCCATCATCGGATCCAAGTCCTCAACCAAAACGTTCTCCTCTAACTCTTACTCCCACAGATGAACTCGAATGGGTCCCACTCCCCAAACACCCTCTCTTCTCCACCTCATGCGCTGCCGCAACATCCCCCACTTCCTCCAGGAACCTTCTCGCATGGGACGGAGCCTCCCGCCTCTATTTCTGGGACTACCACGCCAACTCTCTCCACCGCCTCTCTCTCCGCCTCGGCGACCCCGACCCTACCTCCGTTCTCGCCTCTTCCCCCTCGAAGGTATTGCAAACTGACGTGGAGCTCGGCTTTGATGTTGAGAGAATCTCTATCAACAGAAATGGAACTGCGATGCTACTTTTCGGTTCTTATAGACTCTCTGTTATGTATCTCTATGGACGTGCTTCCAAGAAAGATGTCAATTTGATATGCAGGACTATTGCAGTTGGTCCAGAAACTTATTCCAGCGGCAGCAACGATATTCGTGTATTACAAGCGATATGGCACCCTTACAGTGATACTCATTTGGGAATCCTTTCTTCTGATTCAGTTTTCCGGCTTTTCAATCTGGCTATAGATCCTTTGCTGCCAGAGCAAGAATATTATCTGCAACCTGTGGAGCCTGGTAGATCAAGGAATGCCTCATCAGTGTGCCCAGTAGATTTTTCTTTTGGGGGTGACCATTTATGGGACAGGTTCAGTGTTTTTATTTTATTCAGTGATGGAGCTATCTTTGTCCTTTGCCCTGTTGTTCCATTTGGAAGCCACTTCAAATGTGAGTCCTTATTAGAAATATACAATGATGCACATACATTTGGCCTGAAATCAGCCAACTCTTTAGCGGCTAGTAATTCAAAATTGGCAATCTCCTGGTTAGAAGCAACCGTTCCTGAATTGCTGAACCAAGAGACAGAAGGAGACAACCATTCTTTGCTGAGAGCTAATGCTTATGCTATATTTGATGCATCACTTGTCTTGCAGGGACCTCTGAGAAGAGTAGGTCAGGGTCGAAATGAAGATTCATTTGGTCGTAGTATTGAATGTGAAGGTCGTGCAGTTAGTTTTCTATACAATTTAGTCAGCAAAGACTCTATTTTAGTTACCTCCTGGAGTGGTGGACAATTACAGATAGATGCTCTAGCTGATGAGGTCCAACCTCTCTGGACTGTTGGTAGTCCACCTCGTCTCCGTGTCGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAAGCAACTGCCATTGACTGTCTTGATAGACTTGATCACAATGCCTGGTTGGGCAATCCACCCCCTTTGCTGAGGCTGGCTATTGTAGATTTGGCACTGCCACGTAGAGCAGAAAGTGGTTACAGTATTTCTTTGTTCAGTGATACTCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGATTCAATAGTATTGCATTTTCTTCCATTCACGAGTCAATCAAATGGGAAGGATGATACAATGAGAACGCCTTCTGTGCATCCTGTTCTTAATACATGCCAGAGTGGTTGTACGTCAGAGCCTTCACTCTGTGGTTTCCTATCATTGTCCGATTCATTTGGATATTCGTGGATAGTGGCTGTCACTCTTTCTCAAGAATGTGTTGTCCTAGAGATGAAAACTTGGAACCTCTTGCTTCCAATAAGCATTGATGCAGAGAAGCCGTCAATTCAAGTGGAAGGAGAATCAAAAGAGAGAGACAAACTAACTATAATTAGCAAAGAACTACTTGGTGGGCCCAAGGAGGTACTTGTTCCTCAGGCAGCTCCATCTTTGCGTTCTGTTGCAGCTGATTCAATTGAAGGCAGATCTACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGCACATAAGGTGTATCTGGAGCTCAAACATCATGCACCTCAGTTGAAGAAAATCATTAATGATCAACAGTCTCGTTTGGGTGATGCACAGCAGAAACTCATAAAAGTTGAGGAGAAAGAGTCTATGTTACAGAAAAGGATAGAACGTGTAACACAGATGCACAATTCCTTGGAAGAGCGTTTGCAGCGATTAAGGAACTTACCTTGTGCTCACAAAAAACCACTGTCTAGAGCGGAGCGACAATTTAAGTCTGAGCTTGACCACTTCAGAGAAGTTGAGTTGGATGCCTTGCATTCTTCCGTTGATGCGCTAAATGAAAGGCTAAGAAGACACATGCAAGCATCCACTAATGCTAGTCGCCAACAACAAAGAATAGCAGGGAAGAAAGTTGGTGCTGGGGAGGACCAGATGTCTATGCTCAAATCATCCCTTGAAAAACTCACCCTCGTAAATACTGAAAATTCAAAGAAAGTTAAGCTTGTTGAGTCTACTCTGAAAAACAAAGAAAAAAGCAGCAGAGAACCAAGCCTGCCTTTGCTTTAA 2430 0.4403 MRITLDPSSDPSPQPKRSPLTLTPTDELEWVPLPKHPLFSTSCAAATSPTSSRNLLAWDGASRLYFWDYHANSLHRLSLRLGDPDPTSVLASSPSKVLQTDVELGFDVERISINRNGTAMLLFGSYRLSVMYLYGRASKKDVNLICRTIAVGPETYSSGSNDIRVLQAIWHPYSDTHLGILSSDSVFRLFNLAIDPLLPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSDGAIFVLCPVVPFGSHFKCESLLEIYNDAHTFGLKSANSLAASNSKLAISWLEATVPELLNQETEGDNHSLLRANAYAIFDASLVLQGPLRRVGQGRNEDSFGRSIECEGRAVSFLYNLVSKDSILVTSWSGGQLQIDALADEVQPLWTVGSPPRLRVDSHDQILGLAMICEATAIDCLDRLDHNAWLGNPPPLLRLAIVDLALPRRAESGYSISLFSDTLMPERIYSLHDGGIDSIVLHFLPFTSQSNGKDDTMRTPSVHPVLNTCQSGCTSEPSLCGFLSLSDSFGYSWIVAVTLSQECVVLEMKTWNLLLPISIDAEKPSIQVEGESKERDKLTIISKELLGGPKEVLVPQAAPSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQQSRLGDAQQKLIKVEEKESMLQKRIERVTQMHNSLEERLQRLRNLPCAHKKPLSRAERQFKSELDHFREVELDALHSSVDALNERLRRHMQASTNASRQQQRIAGKKVGAGEDQMSMLKSSLEKLTLVNTENSKKVKLVESTLKNKEKSSREPSLPLL* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1430 809 Coils Coil 648 696 - -
Ahy20g1430 809 PANTHER NUCLEOPORIN NUP84-RELATED 22 799 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Ahy20g1430 809 MobiDBLite consensus disorder prediction 743 763 - -
Ahy20g1430 809 Coils Coil 723 750 - -
Ahy20g1430 809 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g1430 809 Pfam Nuclear pore component 454 790 IPR019321 -
Ahy20g1430 809 Pfam Nuclear pore component 33 227 IPR019321 -
Ahy20g1430 809 MobiDBLite consensus disorder prediction 790 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1430 Ahy-Chr20 35488286 35495944 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1430 K14318 - gmx:100801853 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1430 20 35488286 35495944 Ahy20g1430 20 35488286 35495944 ECH
Ahy20g1430 20 35488286 35495944 Ahy10g1055 10 24508799 24516018 hybridization