Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1423 ATGGGCTCATTATGGCGCGCAGGAAAGAAGCTCTCTCTTGTTGCCTCCGCCGCTGCCGGTGGCACCGCGGCAGCGCTCATTGCCACCTCTGACGACCCCGCAACAGCTCTCAGGCTCTGCGCCACCGTTCCCCACCGCCTCCTCCGCGACGCCGTCACTGCCGCCAACATTGCGTTCGATTATGAATATTCACTGCGTGGATTGCGGGAGGGAAGCATTGAGAGGGAGATGGTCAAGCATGAAGTTCACCTCCGGTCAGCAGAGAAACTTCGAGACTTGTGTTTTAAGAATGGTGGGATTTATATAAAGCTTGGGCAGCATCTTGGGCAGTTGGAGTACTTGGTTCCTCAAGAGTATGTTATAACATTGAGGGAATCTATGCTAAATAGATGTCCAGTTTCTTCATATGAGCAAATATGTGAAGTATTCAAGAGGGAGCTTGGAGACACACCGGAAAATATATTTGCTGAGTTTGACCCAATTCCAATAGCAAGTGCTTCCCTTGCACAAGTCCATGTAGCCCGCACACATGATGGCCAAAAAGTTGCTGTGAAGGTTCAGCATGCTCACATGACTGAGACTGCAGCTGCAGATCATGCCACAGTGGAATTGGTTGTGAACACTCTGCATAGGTTTTTTCCCAGTTTTGATTATAGGTGGTTGATTGATGAGATTAATGACAGTTTACCCAAGGAATTAGATTTTTTGGTCGAGGCAAAGAATAGTGAGAAGTGTGTGGAAAACTTCCGGAAGTTGTCTCCTCATGTTGCAAATTATGTATATGCTCCAAAAGTATATTGGAATCTAAGTACCTCAAAGCTTCTAACGATGGAATTCATGGATGGTGCTCACATAAATGATATCAAGACCATTCGAAAACTTGGAATCCATCCACATGAACTTTCAAAATTGGTAAGTCAGACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCACTGCGATCCACATTCCGCAAACTTATTGGTTCGTCCAATGCCTTCTGGGAAACGTAATATTCTGGGCTGGAGAAAACCTCAGTTGATTCTTTTAGATCATGGACTCTACAAAGAACTTGACTTCGATACAAGAACTAATTATGCTTCACTGTGGAAGGCTTTGGTATTTTCTGATGTTAATGCAATCAAGGAATATAGTGCAAAATTGGGTGCTGGAGAGGATTTGTATGTACTTTTTGCCGGAGTTCTGACTATGAGACCATGGAAAAGAGTTGTTGACCAATCACTGGATCATTTAGTTTTTAACGGAACAGAGAGTGAAATTTCAGAACTGCAGATGTACGCTTCTGAATATTTCCACCAAATCTCAGAGCTTCTAAGGAGATTACCGCGTGTGATTCTTCTAATGCTGAAGACAAATGACTGTCTACGAGCAGTCAACAATTCTCTGCTGCAAGGATCTTCTCTGGACACATTTTTCATTATTGGAAAGATTTCTTCCGAGGCTGTCATTGATGTGAAGATGTCGCAAAGTAAGTCCCTTTTAAGTTGGTTGAATGTCAGATTGGAAAAGATTTTGCTGGAAGTACGACTTTGGGGAATTCAGATAGTCTTGTGGATTTACCAAATAAGAAAGGCGCTATCTTGGTCTGACCAAGGATTAGTATAA 1629 0.4328 MGSLWRAGKKLSLVASAAAGGTAAALIATSDDPATALRLCATVPHRLLRDAVTAANIAFDYEYSLRGLREGSIEREMVKHEVHLRSAEKLRDLCFKNGGIYIKLGQHLGQLEYLVPQEYVITLRESMLNRCPVSSYEQICEVFKRELGDTPENIFAEFDPIPIASASLAQVHVARTHDGQKVAVKVQHAHMTETAAADHATVELVVNTLHRFFPSFDYRWLIDEINDSLPKELDFLVEAKNSEKCVENFRKLSPHVANYVYAPKVYWNLSTSKLLTMEFMDGAHINDIKTIRKLGIHPHELSKLVSQTFAEMMFKHGFVHCDPHSANLLVRPMPSGKRNILGWRKPQLILLDHGLYKELDFDTRTNYASLWKALVFSDVNAIKEYSAKLGAGEDLYVLFAGVLTMRPWKRVVDQSLDHLVFNGTESEISELQMYASEYFHQISELLRRLPRVILLMLKTNDCLRAVNNSLLQGSSLDTFFIIGKISSEAVIDVKMSQSKSLLSWLNVRLEKILLEVRLWGIQIVLWIYQIRKALSWSDQGLV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1423 542 PANTHER ABC1 FAMILY PROTEIN 8 532 - -
Ahy20g1423 542 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Ahy20g1423 542 SUPERFAMILY Protein kinase-like (PK-like) 129 331 IPR011009 -
Ahy20g1423 542 CDD ADCK1-like 126 390 IPR045307 -
Ahy20g1423 542 PANTHER BNAC04G05270D PROTEIN 8 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1423 Ahy-Chr20 35216973 35222352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1423 K08869 - gmx:100796182 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1423 20 35216973 35222352 Ahy20g1423 20 35216973 35222352 ECH
Ahy20g1423 20 35216973 35222352 Ahy10g1050 10 24333387 24338844 hybridization