Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1414 ATGCACATGACCAGCATTCGCTCATCCTCCTCCGCCGCAGAATCAACCATGGAAGACTCGTCAAACCACCGCCGCCACAAGAGCCACCGCCACCGTCCCTCAACCACCACCACCACCGTGAGCACCACGACCGGCGAATCGGACTGTGAGGTGGAGGAAGGGGAGGAAGGTGACCCTGAGGTTTGGGCCAACATGAACCGGAGCTTCCGTCAGGTTCAGTCGGTGCTGGACCGGAACAGAGCTCTGATCCAGCAGGTGAACGAGAACCACCAGTCTCGGATTCCCGATAAGATGGTGAAGAACGTTTCGCTCATTCAAGAGCTTAACGGTAACATTTCTAAGGTCGTTTCTATGTACTCTGATCTTAATTCCAACTTCACCAACGCCTGCCAGCACCGTTCCAAGAACGGTAACTCCCTCCGCCGCGGTGACAACTAA 438 0.5548 MHMTSIRSSSSAAESTMEDSSNHRRHKSHRHRPSTTTTTVSTTTGESDCEVEEGEEGDPEVWANMNRSFRQVQSVLDRNRALIQQVNENHQSRIPDKMVKNVSLIQELNGNISKVVSMYSDLNSNFTNACQHRSKNGNSLRRGDN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1414 145 PANTHER PROTEIN ELF4-LIKE 4 17 138 IPR040462 GO:0042753
Ahy20g1414 145 MobiDBLite consensus disorder prediction 1 17 - -
Ahy20g1414 145 Pfam Early Flowering 4 domain 57 136 IPR009741 -
Ahy20g1414 145 MobiDBLite consensus disorder prediction 1 60 - -
Ahy20g1414 145 PANTHER PROTEIN EARLY FLOWERING 4 17 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1414 Ahy-Chr20 34492569 34494023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1414 - - ahf:112715393 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1501 17 28942853 28944313 Ahy20g1414 20 34492569 34494023 ECH
Ahy20g1414 20 34492569 34494023 Ahy20g1414 20 34492569 34494023 ECH
Ahy20g1414 20 34492569 34494023 Ahy10g1045 10 23865426 23866854 hybridization