Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1407 ATGTCCAAACAGACTTACAGAGTTTGCTTCTGCTGCCGCCGGCGATTCAAGCTCGCCGTGTCGGAGGCGCCGCCGGAGATAAGGAATCTCTTCGACCGGTACTCCGAGAACGGGCTCATGACGGCGTCGCATCTGCGGAGCTTCATGGTTGAAGTGCAGAGAGAGGAGACAGCGACGGAGGAGGAAGCGCAGGGAATCATCGATGGACTCAAGCATCTCAGTATCTTCCATAGAAGAGGTCTCAATCTCGAAAGTTTCTTTAAGTTCCTCTTCAGTGATAACAATCCACCACTTGCACAACCAAAGGTGCACCATGATATGAATGCACCATTGTCTCATTATTATATATTTACCGGTCACAATTCCTATCTGACGGGAAATCAGCTTAGTAGTGACTGCAGTGATGTCCCCATCATACGTGCACTGCAGAGAGGTGTTAGGGTCATTGAATTGGATATATGGCCCAATGCATCAAAGGATGATGTGGATGTTCTTCATGGAAGGACATTGACTACTCCCGTGGCACTCATCAAATGTTTGAGGTCTATTAAGGAGCATGCTTTTGTTGCATCAGAATATCCAGTTGTAATAACCTTAGAAGACCATCTTACTCCTGATCTTCAAGCCAAAGTGGCTGAGATGATTACTCAAACTTTTGGAGACATACTATTTTGTCCTACCCCAGAAAGTGTGAAGGAATTCCCTTCTCCCGAATCACTTAAAAGAAGGGTCATTATATCAACCAAACCACCTAAGGAGTATCTTGAGGCAAAAGACATAAAGGAAAAGGAGGATGAATCACATCAGGGAAAGGCTTTGGGTGACGAAGAAGCATGGGGGAAGGAAGTCCCAAGTCTTAAAGGCGGTACTATTGCTGATTACAAGAACAATGGGAATGATGATGATGATGATGATGATGACAATGACAATGACGATGATGATGAGGAAGATGCTGATGAAGAAAAGTCTCGTCAAGATGTATGTGCTGAATATCGACGTTTGATCGCTATTCATGCTGGAAAGCCCAAAGGAGGATTACTTGAAGGTCTTAGAGTGGATCCTGATAAAGTGAGGCGATTAAGTCTAAGCGAGCAGCAGCTTGAAAATGCTGCTTTATCTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGCACTCGCATTACCTCGTCGAATTATAACCCATTAATTGGGTGGATGCACGGAGCGCAAATGGTTGCATTTAACATGCAGGGCTATGGCAGGTCTCTGTGGTTGATGCAGGGAATGTTCAAAGCTAATGGAGGATGTGGCTATGTTAAAAAACCAGATTTTCTATTAAAGACTGGTCCAAATAATGAGGTCTTTGATCCAAAGGCTAAGTTGCCTGTGAAGACTACTTTGAGGGTAACTGTATATATGGGAGAAGGATGGTACTACGATTTCAAGCATACACACTTCGATCAATACTCACCTCCAGATTTCTATGCAAGAGTGGGGATTGCTGGAGTCCCTGATGACACTGTGATGAGGAAAACCAAGACAAAAGAGGACAATTGGTTGCCAACTTGGAACGAGGTATTCGAGTTCCCACTATCTGTTCCAGAACTGGCTTTGCTTCGTGTAGAAGTTCACGAGTATGATATGTCTGAGAAGGATGACTTTGGTGGACAGACATGCTTGCCTGTGTGTGAACTTCAGACCGGAATTCGAGCAGTTCCACTGAATAACCGCAAGGGAGAGAAGTACAACAATGTGAAGCTTCTCATGCGCTTTGAGTTCATCTGA 1791 0.4444 MSKQTYRVCFCCRRRFKLAVSEAPPEIRNLFDRYSENGLMTASHLRSFMVEVQREETATEEEAQGIIDGLKHLSIFHRRGLNLESFFKFLFSDNNPPLAQPKVHHDMNAPLSHYYIFTGHNSYLTGNQLSSDCSDVPIIRALQRGVRVIELDIWPNASKDDVDVLHGRTLTTPVALIKCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMITQTFGDILFCPTPESVKEFPSPESLKRRVIISTKPPKEYLEAKDIKEKEDESHQGKALGDEEAWGKEVPSLKGGTIADYKNNGNDDDDDDDDNDNDDDDEEDADEEKSRQDVCAEYRRLIAIHAGKPKGGLLEGLRVDPDKVRRLSLSEQQLENAALSHGKEIVRFTQRNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLKTGPNNEVFDPKAKLPVKTTLRVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPDDTVMRKTKTKEDNWLPTWNEVFEFPLSVPELALLRVEVHEYDMSEKDDFGGQTCLPVCELQTGIRAVPLNNRKGEKYNNVKLLMRFEFI* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1407 596 SMART C2_3c 468 576 IPR000008 -
Ahy20g1407 596 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Ahy20g1407 596 PRINTS Phospholipase C signature 407 425 IPR001192 GO:0035556
Ahy20g1407 596 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Ahy20g1407 596 PRINTS Phospholipase C signature 386 407 IPR001192 GO:0035556
Ahy20g1407 596 PRINTS Phospholipase C signature 562 572 IPR001192 GO:0035556
Ahy20g1407 596 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Ahy20g1407 596 SUPERFAMILY PLC-like phosphodiesterases 105 449 IPR017946 GO:0006629|GO:0008081
Ahy20g1407 596 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Ahy20g1407 596 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 596 - -
Ahy20g1407 596 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy20g1407 596 SMART plcy_3 331 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy20g1407 596 MobiDBLite consensus disorder prediction 255 325 - -
Ahy20g1407 596 ProSiteProfiles C2 domain profile. 449 578 IPR000008 -
Ahy20g1407 596 Gene3D - 22 101 - -
Ahy20g1407 596 SUPERFAMILY EF-hand 24 101 IPR011992 -
Ahy20g1407 596 CDD C2_PLC_like 466 595 - -
Ahy20g1407 596 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 596 IPR001192 GO:0035556
Ahy20g1407 596 MobiDBLite consensus disorder prediction 255 282 - -
Ahy20g1407 596 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 468 595 IPR035892 -
Ahy20g1407 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Ahy20g1407 596 Pfam C2 domain 469 570 IPR000008 -
Ahy20g1407 596 CDD PI-PLCc_plant 104 435 - -
Ahy20g1407 596 MobiDBLite consensus disorder prediction 298 321 - -
Ahy20g1407 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 361 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy20g1407 596 Gene3D C2 domain 463 596 IPR035892 -
Ahy20g1407 596 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 461 IPR017946 GO:0006629|GO:0008081
Ahy20g1407 596 SMART plcx_3 105 249 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1407 Ahy-Chr20 34266825 34271905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1407 1 596 Acyl Lipid Metabolism Gene Families AT3G55940 67.504 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1407 K05857 - gmx:100784534 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1407 20 34266825 34271905 Ahy10g1037 10 23680579 23685527 hybridization
Ahy20g1407 20 34266825 34271905 Ahy17g0929 17 11267596 11271725 PCT
Ahy17g0929 17 11267596 11271725 Ahy20g1407 20 34266825 34271905 PCT