Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1397 ATGTCCAACACTTCACCAGATTGGCCTGAACCAATAGTGAGAGTTCAATCCTTGTCGGAAAGATGCATAGACTCAATCCCAGACAGGTATATCAAGCCCCCGACCCATAGGCCGGTTTCTGCTTCTACTTTTACTTCCACTTCGGATGCAAATATCCCAGTCATAGACTTCGGAGACTTTCTGGGAACCGACCCGGACGCAAGGAGGTTGGTGCTCCAGAAAGTCGCCGAGGCCTGCAATGACTGGGGGTTCTTCCAAGTGGTGAACCACGGGGTTAGACCAGAGTTGATGGACAAGGCTCGGGAAACTTGGCGTGAATTCTTTCACCTTCCCATGGAATTGAAGCAAAAATATGCAAACTCTCCAAAGACTTACGAAGGTTATGGAAGTAGGCTTGGTGTTGAAAAGGGTGCTATTCTTGATTGGAGTGATTACTATTTCCTTCACTACCTTCCTTTGTCACTCAAAGATTATAACAAATGGCCTTCTTTGCCTCTCTCTTGCAGGGAAGTGTTTGATGAATATGGGAGAGAGGTGGTGAAGCTAGGAGGGAGGTTGTTGAAGGCTTTGTCTATAAACTTAGGTTTAGAAGAGGATTTTCTCCAGAATGCATTTGGGGGTGAAGATATTGGGGCATGTTTGAGGGTTAATTTTTACCCAAAGTGCCCTCGGCCGGAGCTGACGCTTGGTCTGTCGTCGCACTCGGACCCCGGAGGGATGACGATGTTGCTGCCGGACGACCAAGTTGCCGGCCTTCAGGTTCGGAGAGGCGATGAATGGATCACGGTGAAGCCTGCTCGCCATGCCTTCATTGTTAATATTGGAGATCAAATTCAGGTTATAAGCAATGCAAAATACAAGAGCGTGGAGCACAGAGTAATAGTAAATTCAGATAAAGAGAGAGTATCATTGGCATTTTTCTACAACCCAAAAAGTGACATACCCATTCAGCCAGCAAAGGAATTGGTAACCCCAGACACCCCTTCACTCTACCCTCCCATGACCTTTGATGAATATAGGCTCTTCATTAGAACCAGAGGTCCACGTGGCAAATCCCAAGTGGACTCTCTAAAATCTCCTAGATAA 1086 0.4687 MSNTSPDWPEPIVRVQSLSERCIDSIPDRYIKPPTHRPVSASTFTSTSDANIPVIDFGDFLGTDPDARRLVLQKVAEACNDWGFFQVVNHGVRPELMDKARETWREFFHLPMELKQKYANSPKTYEGYGSRLGVEKGAILDWSDYYFLHYLPLSLKDYNKWPSLPLSCREVFDEYGREVVKLGGRLLKALSINLGLEEDFLQNAFGGEDIGACLRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVAGLQVRRGDEWITVKPARHAFIVNIGDQIQVISNAKYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIQPAKELVTPDTPSLYPPMTFDEYRLFIRTRGPRGKSQVDSLKSPR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1397 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 358 - -
Ahy20g1397 361 PRINTS Isopenicillin N synthase signature 75 92 - -
Ahy20g1397 361 PRINTS Isopenicillin N synthase signature 270 296 - -
Ahy20g1397 361 SUPERFAMILY Clavaminate synthase-like 12 346 - -
Ahy20g1397 361 Gene3D - 10 344 IPR027443 -
Ahy20g1397 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 163 IPR026992 -
Ahy20g1397 361 Pfam 2OG-Fe(II) oxygenase superfamily 212 310 IPR044861 -
Ahy20g1397 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 310 IPR005123 -
Ahy20g1397 361 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1397 Ahy-Chr20 32272676 32275992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1397 46 358 Glycosyltransferase AT5G59530 34.154 1.99e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1397 - - gmx:100814471 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1397 20 32272676 32275992 Ahy10g1025 10 22490867 22494152 hybridization