Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1366 ATGTCTCACGAAGAAATGCTTTCTTCGATAATAAATGAAGTCAGCAACTACACTGGAAAAGACCCGCTTCTTCCATGGCTCCGGGGTATCCGAAAGATGAAGGACAGTTTTGCCCCTGAAGCCCTCAAGGAAAAGCTACCAGTGTTGTTGCAGAAATGCGCACAAAAGTTCCAGCTCGATCGCCGTTACAGAAACGACATGCGCTACCTTCGCGTTTGGCTTCACTTGATGGACTTTGTGGATGATCCTGGAGAACTTTTGAGAACAATGGAAGCTAATCATATTGGAACAAAGCGCTGTCAATTCTACCAAGCATATGCACTTTTCTATGAGAAAAGCAAGAAGTATGATGAGGCTGAGAGGATGTACCATCTTGGAGTGAAGAACCTTGCAGAGCCTATGGATGAGTTGCAGAAATCATATGATCAATTCCTTCAGCGCATGGAACGTAGGAATAACAAGAGAAACAATGAAGTGAGAGGTGCCAGAAGACCTCTGGCTGCAAAAGGCAACCCTTCTGTTGCGAATAATATTGAGGGAAGCAGTGGAGCATGCAGTGTTGAGGGTGTGCAAAAGGGACCCCAAGTTGTGAGTTCTGAAGCTGATGATGCCAATGATAGAAATGTAAAGAATAGAAAAGATGAATGCAAGAGGGTTTTGGGGGAGAACACAGTAGTTGTATCTAAATTTGTTGACACTGCCATTGTTGGGAAATCAGAAGCAGAAGATGCATGCCATCATGGACTGGTGGATCCCACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGGGCACCATTAGAGACAGTCCCAGTACCCCGGAAATCACAGAGAAACCAGTTGAAGGAAGATCGTAGTATGAAGAATGGGTTTGAAGTATTTGTTGACGAAAACTTGGATAATGGAATGAAACCAACTGGTTCTTCGCAGAAGAGAACTGAAGCCAGCCAACCTCCCCAAGAACTACTTAAGATATATATTGATGATGAAGGATTCTCTGAGACCAGTGATGTAAATGCGAATTCACATGAAGATTCTACTTCATCAGCTTCACAACCGAATGGTTTGGTTTTCCCCCATCCCAAGGATCTTCCTTCTGAAAAATCTAGTGATAGAGACGAAGAAAGTTCCCATAAATCAAAGTTTAGAGAGGATACAGTTGTGTGCAGATTTGTTGGCTCTGCAATCTTGGATGAGCCAGAGGTGGAGAATGTTTGCCACCATGGTTTGGTGGACCCAACAATCAACATGAAGGAAGCCATGAATGACATAAATAACATGTTTGGAAAGCCAATGGATTTTGTTAGGAAAAAAAGATCAATGAAACTGGAGAAAGCTCCTGAGATCAACAGGGGAAAGGAACTTGATGGCTTTTCAATCCTTGCTGATGATGATATGGAGCAGCAACAAGTTGCGCCACCACCAAAATTTTCGCGAAAGTCAAAGGAATGCGAGTTATATGAGCCAACTATCCACACAAAGGAAGCGATGGACAACATAAACAAGATGTTTAATATGCCATTGGATTTTTAA 1545 0.4272 MSHEEMLSSIINEVSNYTGKDPLLPWLRGIRKMKDSFAPEALKEKLPVLLQKCAQKFQLDRRYRNDMRYLRVWLHLMDFVDDPGELLRTMEANHIGTKRCQFYQAYALFYEKSKKYDEAERMYHLGVKNLAEPMDELQKSYDQFLQRMERRNNKRNNEVRGARRPLAAKGNPSVANNIEGSSGACSVEGVQKGPQVVSSEADDANDRNVKNRKDECKRVLGENTVVVSKFVDTAIVGKSEAEDACHHGLVDPTINMKEAMNAINSMFRAPLETVPVPRKSQRNQLKEDRSMKNGFEVFVDENLDNGMKPTGSSQKRTEASQPPQELLKIYIDDEGFSETSDVNANSHEDSTSSASQPNGLVFPHPKDLPSEKSSDRDEESSHKSKFREDTVVCRFVGSAILDEPEVENVCHHGLVDPTINMKEAMNDINNMFGKPMDFVRKKRSMKLEKAPEINRGKELDGFSILADDDMEQQQVAPPPKFSRKSKECELYEPTIHTKEAMDNINKMFNMPLDF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1366 514 MobiDBLite consensus disorder prediction 338 384 - -
Ahy20g1366 514 Coils Coil 134 154 - -
Ahy20g1366 514 Pfam Mad3/BUB1 homology region 1 10 127 IPR013212 -
Ahy20g1366 514 MobiDBLite consensus disorder prediction 338 359 - -
Ahy20g1366 514 PANTHER OS11G0128700 PROTEIN 3 514 - -
Ahy20g1366 514 Gene3D - 8 162 - -
Ahy20g1366 514 MobiDBLite consensus disorder prediction 150 210 - -
Ahy20g1366 514 MobiDBLite consensus disorder prediction 297 324 - -
Ahy20g1366 514 MobiDBLite consensus disorder prediction 368 384 - -
Ahy20g1366 514 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 3 514 IPR015661 GO:0007094
Ahy20g1366 514 SMART mad3_bub1_i 3 127 IPR013212 -
Ahy20g1366 514 ProSiteProfiles BUB1 N-terminal domain profile. 10 165 IPR013212 -
Ahy20g1366 514 MobiDBLite consensus disorder prediction 306 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1366 Ahy-Chr20 30135958 30139294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1366 - - gmx:100806627 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1366 20 30135958 30139294 Ahy20g1366 20 30135958 30139294 ECH