Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1310 ATGGCTTGTGATAATAACAACTTCCCTGATGTGTTTTCTTGGATTCAGAACCTTAAACCAATATCTGAATGGGAAACAGATTCCATGTCCATAACCATATCTTCTTCTTCTTCTTCTTCATTCCAAGAACCATATCTTAAGCTTACAATACCCAAAAACTATAATCATCATAACCAATCCTCACTCTCTTTTGCTATCATTGCAGATTTCAACAACATCCACATCCCTCTTTGGAACTCAAAACCAATGAAACCTAACAACAATAACTTATTATTACTGGATCAAGAAACAATTTCAGATCTCTTCATCAATTTCATTCAGGCAATTCTCCACTATGGATCCAACAAGAACAGCCCTTTCATCAGGTTCCCGAAACTCGATTACATCCCAAACTTCTCCGAAATATTCAACGTCTCCTTCTTCACTCTCTCCTTCCTCGTCTCCATCTACGAAGCGCCGGCGAATCTTCGCTCCGGATCGATCCAGACTCTGAAGGGTTACTTGACAAGCAATCAACAAAGCGAGGCCTCGAATTTGCTCATGAAACTGCTGGGATCAAACTTGGAAGAACAATGGATGCGGTCCGTGAACCTTGGGGTCACGAATTGGATTGGGGAGATGCAAGAAACGGTTAAAGAAAAGATTATGAGGATGCCGTGTTCTTTGTTCTCGCATTGGTTTTCGACGTATGGGTTATGGAAGGTGCAACTGTATTGTCCTGTTATAGTTATGGATATTGAGAGTTCATCAAAGAGTCATTTGCCGAATGAGAAGCTTCAATTCTCTCTCAAGTATCACCAGCTTCAAGGTGTTATTCAGTTCAATTACAGTGTCTCCATCAAGGACAAGTGGGTTGAAATTGTCGCCAACATTGATAACATAAGGTGTGATGTTATGAAATTGGTGAAGAACTCCCTTCTAAGGGAAAGAGGTGCCGGTGCAACTGAAAAACACTTTCCTTCAAGAATCTCTCTACAACTCACACCAACTCTACAAACCCAAGTATTAAGTGTCTCCGTTGGAAAATCCTCAGATAATCCAACAAGAGAAATTGGTACGGAAAAAAACATAGAAGCCTCATTTGACCCACCAAATCCCTTGGGGCTCAAGGTATCCGCCGGCGAATCCATGACCGTTAGTTTAAAGCCATGGAAATTTGAGGAATCCATTTACGGCTACAGCGCCAATTTAAATTGGTTCCTTCACGATAGCATGGATGGTAAGGAGGTTTTTTCGTCCAAGCCTTCGAAATTCGCTCTGATTAACCCTAAGTCATGGTTCAAGAACCGGTACTCTAGAGCTTATAGACCGTTCACTAGGCAAGGAGGTGTTATTTTTGCTGGTGATGAATATGGAGATAAAGTGTTATGGAAAGTGGAGAAAGATGCTATTGGGAAAACTATGGAGTGGGAGATAAGGGGTTGGATTTGGTTAACTTATTGGCCTAACAAGCACAAAACTTTCTACAATGAAACTAGGAGGTTTGAGTTTGGAGAAATAGTCCATCTCCATGTTGCTTAG 1521 0.4116 MACDNNNFPDVFSWIQNLKPISEWETDSMSITISSSSSSSFQEPYLKLTIPKNYNHHNQSSLSFAIIADFNNIHIPLWNSKPMKPNNNNLLLLDQETISDLFINFIQAILHYGSNKNSPFIRFPKLDYIPNFSEIFNVSFFTLSFLVSIYEAPANLRSGSIQTLKGYLTSNQQSEASNLLMKLLGSNLEEQWMRSVNLGVTNWIGEMQETVKEKIMRMPCSLFSHWFSTYGLWKVQLYCPVIVMDIESSSKSHLPNEKLQFSLKYHQLQGVIQFNYSVSIKDKWVEIVANIDNIRCDVMKLVKNSLLRERGAGATEKHFPSRISLQLTPTLQTQVLSVSVGKSSDNPTREIGTEKNIEASFDPPNPLGLKVSAGESMTVSLKPWKFEESIYGYSANLNWFLHDSMDGKEVFSSKPSKFALINPKSWFKNRYSRAYRPFTRQGGVIFAGDEYGDKVLWKVEKDAIGKTMEWEIRGWIWLTYWPNKHKTFYNETRRFEFGEIVHLHVA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1310 506 PANTHER - 6 506 - -
Ahy20g1310 506 PANTHER EXPRESSED PROTEIN 6 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1310 Ahy-Chr20 26877787 26881804 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1310 - - aip:107620363 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1310 20 26877787 26881804 Ahy20g1310 20 26877787 26881804 ECH
Ahy20g1310 20 26877787 26881804 Ahy10g0970 10 18101379 18105410 hybridization
Ahy20g1310 20 26877787 26881804 Ahy17g0856 17 9846964 9850069 PCT
Ahy20g1310 20 26877787 26881804 Ahy7g0683 7 7730086 7733172 PCT
Ahy17g0856 17 9846964 9850069 Ahy20g1310 20 26877787 26881804 PCT
Ahy7g0683 7 7730086 7733172 Ahy20g1310 20 26877787 26881804 PCT