Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1305 ATGTCATCTTCCCATTCCCAAAACATGAAAATAGGCATAGTGGGTTTCGGCACCTTCGGACAGTTTCTTGCAAAGACAATTATAAAACAAGGCCACACTATAACGGCAACTTCTCGATCAGATTACTCCCATCTCTGCCTCCAAATGGGTATCCATTTTTTCAGGGATATGAGTGCATTCCTTGATGCTGGGAACGATGTAATACTGTTATGCACATCGATCTTATCGCTAGCGGAAGTTATGAGGTCAATGCCACTCACTTGTCTGAAGCGACCAACGCTCTTTGTTGATGTCCTTTCGGTCAAAGAACATCCTAGAAACCTTCTACTCCGAACGTTGCCAGGGGAGTTAGACATACTGTGCACGCACCCAATGTTTGGACCAATCAGTGGGAAGGATGGGTGGAAAGATCTCACTTTCATGTATGACAAAGTTCGAATTCAAGATGAAGCCAAATGCTCTCGTTTCCTCCAAATTTTTGAAACTGAGGGTTGCAGGATGGTAGAAATGTCCTGTGAGGAACATGATAAAGCAGCTGCTAGGAGCCAATTTATCACACACACAATAGGCAGGACATTGGGAGAAATGGATATAAGGTCCACACCTATTGACACTAAGGGCTTTGAGACACTTGTTCAATTGAAGGAGACCACCATGAAATGTAGTTTTGATCTGTACAGTGGATTGTTCACGCATAACAGATTTGCCATACAAGAGCTGGAAAACCTTGAGCATGCCTTGTTCAAGGTCAAAGAGATGCTGGTTCAAATGATGAAAGAGGAGCAGGGTCAAGAAAAAACTGAAAGTTGA 810 0.4321 MSSSHSQNMKIGIVGFGTFGQFLAKTIIKQGHTITATSRSDYSHLCLQMGIHFFRDMSAFLDAGNDVILLCTSILSLAEVMRSMPLTCLKRPTLFVDVLSVKEHPRNLLLRTLPGELDILCTHPMFGPISGKDGWKDLTFMYDKVRIQDEAKCSRFLQIFETEGCRMVEMSCEEHDKAAARSQFITHTIGRTLGEMDIRSTPIDTKGFETLVQLKETTMKCSFDLYSGLFTHNRFAIQELENLEHALFKVKEMLVQMMKEEQGQEKTES* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1305 269 Coils Coil 240 260 - -
Ahy20g1305 269 Gene3D - 1 176 - -
Ahy20g1305 269 Pfam Prephenate dehydrogenase, nucleotide-binding domain 24 137 IPR046826 -
Ahy20g1305 269 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 3 266 - -
Ahy20g1305 269 PANTHER AROGENATE DEHYDROGENASE-RELATED 3 266 IPR045011 GO:0006571|GO:0033730
Ahy20g1305 269 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 9 269 IPR003099 GO:0004665|GO:0006571|GO:0008977
Ahy20g1305 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 170 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1305 Ahy-Chr20 26684950 26687180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1305 K15227 - gmx:100787362 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1305 20 26684950 26687180 Ahy20g1305 20 26684950 26687180 ECH
Ahy20g1305 20 26684950 26687180 Ahy10g0965 10 18059215 18061388 hybridization