Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1301 ATGGGGAAATCATTTCAATCTTTTTCTCCTCTTCGGATTGTGTCATCTGTAAAGTCGCAACGCCCAAGGCTGACGCAACCGCCCAAACCATCCCCGTCTCAATCTCCCACTAAGGAGCACCAACGGACGCCCCTCGCCGCGGTGGTTGCCGACTGTGCAAGGCGGTGGTTCCATGAGACACTCCAGGAGGCCAAGGCTGGCGACGCCGCCATGCAGGTTCTCGTTGGACAGATGTATTACAGTGGCTATGGCGTTCCTAGAAATCCGAAGAAGGGGTATGATTGGATTAGTAGAGTATCCAGAATTCGGAGCTCAGTTTGGAAAGTGAACAAAAAGCGTCCAGGTTACAGAGCAAGTGATTCAGATTCATGTGAACCGGAGGTCAAAACGAAATCTTGTCGTTAA 405 0.5111 MGKSFQSFSPLRIVSSVKSQRPRLTQPPKPSPSQSPTKEHQRTPLAAVVADCARRWFHETLQEAKAGDAAMQVLVGQMYYSGYGVPRNPKKGYDWISRVSRIRSSVWKVNKKRPGYRASDSDSCEPEVKTKSCR* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1301 134 MobiDBLite consensus disorder prediction 112 134 - -
Ahy20g1301 134 MobiDBLite consensus disorder prediction 1 24 - -
Ahy20g1301 134 PANTHER EXPRESSED PROTEIN 27 131 - -
Ahy20g1301 134 SUPERFAMILY HCP-like 55 100 - -
Ahy20g1301 134 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 27 131 - -
Ahy20g1301 134 MobiDBLite consensus disorder prediction 1 44 - -
Ahy20g1301 134 Gene3D Tetratricopeptide repeat domain 32 105 IPR011990 GO:0005515
Ahy20g1301 134 SMART sel1 69 104 IPR006597 -
Ahy20g1301 134 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1301 Ahy-Chr20 26602463 26607205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1301 - - adu:107469327 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0850 17 9817201 9819077 Ahy20g1301 20 26602463 26607205 ECH
Ahy20g1301 20 26602463 26607205 Ahy20g1301 20 26602463 26607205 ECH
Ahy20g1301 20 26602463 26607205 Ahy10g0960 10 18009345 18012240 hybridization