Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1289 ATGGTTTTAGTTGATAATAACGGGATTGGGAATACCGGGAATGATGAAACTGCGGAATCTAGTAGGAGTAAAATGGAGTTTGCTTCAGTTGATCTTGCAACTTCACAACAGACAATTCTGAACAGTGAAAATCCTCAGGGAAAGTTCGAAGGCACTGTCTCTAGTTCCCTTTCATGCTGGATCAAGTCCCTAAAATTTGGTTCTGCATCTGCCAAATTAAAACGGCTCACTTCCGACAGAGATCAGATTTCACAATCTGTACCTGCTCCTAGTTCTCATGGCATGAGATCACGATTCAGTAACATGTTTGGTCAGAAACTCGGTTGGGGTTCCGTCAAGAAGGTGTGCATGGAATGGATTAAAAATCCAATGAATATGGCCCTTTTCTTTTGGATAGCCTGTGTTGCTGTCTCGGGTGCAATTCTGTTCCTTGTGATGACAGGCATGTTGAATAATGTGTTGACAAGAAAATCTCAGAGAAATGCATGGTTTGAAGTAAACAATCAAATACTCAATGCACTTTTTACGCTTATGTGTTTGTACCAACATCCGAAGCGGTTCTACCACCTTTTTCTTTTGTGTAGATGGAGGCCGAACGACATCTCTAGGTTGCGAAAGATATACTGCAAAAATGGGACTTATAAGCCGAATGAGTGGGTGCACATGATGGTAGTGGTCATTCTCCTTCATGTGAATTGTCTTTCTCAATATGCACTCTGTGGTCTAAACTTGGGGTATAAAAGGTCTGAGAGGCCTGTCATAGGAGTTGGAATATGTGTATCTTTTTCAATTGCTACGCCAGCAATTGCAGGTTTGTACATCATTCTTAGCCCACTTGGGAAGGACTATGATTGCGAGATTGATGAAGAAGCACAGATTCAAACTACATTTTCTCAAAGGCAAGAGCAATTGAGAGAGAACGCACACGAGAAAATATATTCATTTGCATCCAAGGATCAAGAAAAGATTATTGAAGATAGACCAAAGTGGAATGGAGGAATTTTTGACATTTGGGACGATATTTCTCTGGCATATCTCTCACTTTTTTGCACTTTCTGTGTCTTTGGGTGGAATATGGAGAGACTTGGATTCGGAAACATGTATGTTCATATTGCCACTTTTATTCTGTTTTGCATTGCACCTTTCTGGATTTTCACATTGGCTGCTGTTAATATTGATGATGATAAAGTTAGACAAGGTCTTGTGGCCATTGGAATCATCCTTTGTTTTTTGGGTTTACTGTATGGTGGATTTTGGAGGATCCGAATGAGAAAGAGGTTCAATTTGCCTGCCTATAAATTCTGTTTTGGTAAACCTTCAGTTTCCGATTGCACTCTTTGGTTTTGTTGTTGGTGGTGCACCCTAGCCCAAGAATTGCGAACTGCAAATAGCTATGATCTTGTTGTAGACGATGAATTCTGCAGGAAAGAAGTTGATACCGACCAACCATCGGCAATTTTGCCCTTGGTTTGTGAAGATGTAGCATCAACCAAATCCGGCACGAGTTCTCCTAAGGGTAACAACTCTTCTCATCTTATGATAGAAACATCTAGACCTCTTAGTTCAAATAACGCCTCAAATGAATATTACAGTTCGAGTAGGTCTCTATCCCTTGTAGAAAATGTAATAATGAATCCACCAACTCAATCAATAATTGAAAGGGAAGCTCCTTAG 1674 0.4026 MVLVDNNGIGNTGNDETAESSRSKMEFASVDLATSQQTILNSENPQGKFEGTVSSSLSCWIKSLKFGSASAKLKRLTSDRDQISQSVPAPSSHGMRSRFSNMFGQKLGWGSVKKVCMEWIKNPMNMALFFWIACVAVSGAILFLVMTGMLNNVLTRKSQRNAWFEVNNQILNALFTLMCLYQHPKRFYHLFLLCRWRPNDISRLRKIYCKNGTYKPNEWVHMMVVVILLHVNCLSQYALCGLNLGYKRSERPVIGVGICVSFSIATPAIAGLYIILSPLGKDYDCEIDEEAQIQTTFSQRQEQLRENAHEKIYSFASKDQEKIIEDRPKWNGGIFDIWDDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCIAPFWIFTLAAVNIDDDKVRQGLVAIGIILCFLGLLYGGFWRIRMRKRFNLPAYKFCFGKPSVSDCTLWFCCWWCTLAQELRTANSYDLVVDDEFCRKEVDTDQPSAILPLVCEDVASTKSGTSSPKGNNSSHLMIETSRPLSSNNASNEYYSSSRSLSLVENVIMNPPTQSIIEREAP* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1289 557 Pfam PLAC8 family 330 460 IPR006461 -
Ahy20g1289 557 PANTHER PLAC8 FAMILY PROTEIN-RELATED 20 555 - -
Ahy20g1289 557 PANTHER - 20 555 - -
Ahy20g1289 557 MobiDBLite consensus disorder prediction 7 22 - -
Ahy20g1289 557 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 329 463 IPR006461 -
Ahy20g1289 557 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g1289 557 Pfam Protein of unknown function (DUF2985) 118 196 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1289 Ahy-Chr20 25657005 25659819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1289 - - gmx:100811964 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1650 17 35934855 35937287 Ahy20g1289 20 25657005 25659819 ECH
Ahy20g1289 20 25657005 25659819 Ahy20g1289 20 25657005 25659819 ECH
Ahy20g1289 20 25657005 25659819 Ahy10g0953 10 17648437 17651370 hybridization
Ahy20g1289 20 25657005 25659819 Ahy17g0849 17 9813863 9816713 PCT
Ahy20g1289 20 25657005 25659819 Ahy7g0676 7 7699374 7702139 PCT
Ahy17g0849 17 9813863 9816713 Ahy20g1289 20 25657005 25659819 PCT
Ahy7g0676 7 7699374 7702139 Ahy20g1289 20 25657005 25659819 PCT