Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1278 ATGCGCGCCGTAGCTGCTCGCTTTTCTAACTATTTATGTAAGAGGAGACCTGTGATCAGTGTTCAATCTCGTAATTTTTCATCATATAGTGGCAAAGATGAGCTATCTATTGAACAAGAAGCTGAGAGAAAAGTTGGATGGCTATTAAAGACGATATTTTTCGCCACAGCTGCAGCCGCAGGATACCAGTTCTTTCCTTATATGGGAGAAAACTTGATGCAGCAGTCAGTTTCACTTTTGCGCGTCAGGGATCCCTTGTATAAAAGGATGGGAGCTTCTAGGTTGACTCGATTCGCAATAGATGATGAAAGAAGGATGAAGATACTCGAGATGGGTGGAGCTGAAGAGCTCTTAAATATGTTAAGCACGGCTAAGGATGACCGCACACGAAAAGCAGCTTTGGAGGCTCTTGCTGCACTGTCACAATCAGATAAAGTTCTTGCGTCCCTGCACAATGCTGGGGCCATTTCAATCATTAGGTCTGCACCAAATTCACTTGAGGATGCAGAAGTTGAGAAATTCAAGTTGAGCTTGTTGAAGAGGTTCCAGGATCTGAGGGTTTCATATGAAGAAATTGATGGAATTTCGAACTGGATGCAAATATTTTTGTTTGGTAGTTAA 621 0.4251 MRAVAARFSNYLCKRRPVISVQSRNFSSYSGKDELSIEQEAERKVGWLLKTIFFATAAAAGYQFFPYMGENLMQQSVSLLRVRDPLYKRMGASRLTRFAIDDERRMKILEMGGAEELLNMLSTAKDDRTRKAALEALAALSQSDKVLASLHNAGAISIIRSAPNSLEDAEVEKFKLSLLKRFQDLRVSYEEIDGISNWMQIFLFGS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1278 206 Gene3D - 49 197 IPR011989 -
Ahy20g1278 206 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 187 - -
Ahy20g1278 206 SUPERFAMILY ARM repeat 77 165 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1278 Ahy-Chr20 25317115 25322650 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1278 - - gmx:100527372 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1278 20 25317115 25322650 Ahy20g1278 20 25317115 25322650 ECH
Ahy20g1278 20 25317115 25322650 Ahy10g0946 10 17332785 17339097 hybridization