Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1267 ATGAAGCCAGCTCAGTGGGTTTCAGAGCATAAGCTCACTACCATTGGGGCACTGTGGGCGACAGGTGTTGGAGCATCACTGATGGCATATGCACGCACAAAGTCTCGTATGAAACCAAGCCTCAGGCTTATCCATGCCAGGTTGAATGCACAGGCTTTGACTCTAGCAGTTCTATCAGGTGCAGCTGCATATCACTACTACGCTAATATTAATAACGATCAGAATCGTTCTGTTGATGAGGATATTCGAATTAGACCATCTTCTTCACCCAATGTTAAAGACTTCGTTGAATGGGACCTACATTCTCCTTTCTAA 315 0.4508 MKPAQWVSEHKLTTIGALWATGVGASLMAYARTKSRMKPSLRLIHARLNAQALTLAVLSGAAAYHYYANINNDQNRSVDEDIRIRPSSSPNVKDFVEWDLHSPF* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1267 104 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 2 77 - -
Ahy20g1267 104 Gene3D - 12 72 - -
Ahy20g1267 104 Pfam Hypoxia induced protein conserved region 9 60 IPR007667 -
Ahy20g1267 104 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 2 77 IPR040153 -
Ahy20g1267 104 ProSiteProfiles HIG1 domain profile. 1 76 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1267 Ahy-Chr20 24947747 24948602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1267 - - aip:107608949 115.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1267 20 24947747 24948602 Ahy10g0932 10 16899509 16900458 hybridization
Ahy20g1267 20 24947747 24948602 Ahy17g0841 17 9722732 9723669 PCT
Ahy20g1267 20 24947747 24948602 Ahy7g0669 7 7612620 7613526 PCT
Ahy17g0841 17 9722732 9723669 Ahy20g1267 20 24947747 24948602 PCT
Ahy7g0669 7 7612620 7613526 Ahy20g1267 20 24947747 24948602 PCT