Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1261 ATGGAAGCGAAAGCAGATGCAGATTATACACAAGATGGCACTGTTGACTTCCGCGGTCAACCTGCAGTTCCATCTAGAACTGGAAAATGGAAAGCCTGCGCCTTTCTTGTTGGGTATGAAGCATTTGAAAGAATGGCGTTCTATGGAGTAGCTTCAAACTTGGTTAACTACCTTACAAGAGAGCTCCATGAAGACACAGTTTCATCAGTGATCAGTGTGAATAACTGGTCAGGATCTGTTTGGATAACACCAATTCTTGGCGCATACATCGCTGATTCTTACTTGGGTCGTTTCTGGACTTTCACAATTTCTTCTCTCATTTATGTCCTCGGAATGAGTCTGCTGAGCATAGGTGTGTCCCTGAAGAGGTTGAAGCCATCAACCCAAATTACATTCTTCTACACAGCACTCTACACAATAGCAATCGGAGCCGGCGGCACCAAGCCCAACATCTCCACCTTCGGCGCGGACCAATTCGACGACTTCAATCCGAACGAGAAAGAACTGAAAGACTCGTTCTTCAATTGGTGGATGTTCACCTCATTCCTTGGGGCCCTAATTGCCACCCTAGGCCTTGTTTACATTCAAGACAACTTAGGCTGGGGATTGGGCTACGGTATTCCTACGGTAGGTCTACTCATTTCGCTCCTCGTATTCTACGCCGGCACCCCCATGTATCGCCACAAGGTTAACAAGACCCGCAGTCCCGCCACGGAAATCATGAGTGTTCCCATTGCTGCTTTTAAGAACAGGACCCTTCAATTACCCACTCACCCTTCACTCCTTTATGAAAATGACTCTCAATATTATCTTACTACTGCCAAACGTCAAATTCATCACACTCCAACTTTCAGGTTTTTGGACAAGGCTGCAATTAGACAAGAGAGTACTAGTGGTTCCCCAAGAGCACCATTAACAGTAACACAAGTTGAAGGAGCAAAACTCATATTTGGAATGGTCACTATATGGCTGGTAACACTGATTCCCAGCACCATTTGGGCACAAATCAACACCCTCTTTGTGAAACAAGGCACCACATTGGACCGAAAACTCGGCTCCGATTTCAGAATCCCAGCAGCATCTCTTGGAAGCTTTGTCACACTCTCCATGCTTCTCTCAGTGCCAATGTACGACCGGTTCTTCGTCCCCTTCATGCGCCAGAGAACCGGCAACCCCAGAGGGATCACATTGCTCCAGAGACTTGGAATTGGGTTCTCAATGCACATCATAGCTATTGCAATAGCTTATGCAGTGGAAGTTAAGAGAATGCATGTTATAAAGGAAAACAATGCAATTGGTCCTAAAGATGTTGTTCCTATGAGCATATTCTGGCTATTGCCACAATATGTTCTTATTGGTATAGCTGATGTGTTTCATGCAGTTGGATTATTGGAATTCTTCTATGATCAATCCCCTGAAAACATGCAGAGTCTGGGCACAACTTTTTTTACTAGTGGAATTGGTGTTGGGAACTTCTTGAACAGCTTTTTGGTGACTATGGTTGACAAGATCACAGGGAAGGGTGAGAGTAAGAGTTGGATTGGTGATAATTTGAACGATTGTCACTTGGATTACTACTATGGATTCCTGTTGGTGTTGTCAAGTGTGAATTTGATGGTGTTTCTTTGGGCTTCAAGCAGATACATTTACAAGAAGGAGTCTATAATGGTCAAAGATGGACTTTGTGTTGAAATGGAGGAGAATCCATCTATGGATGCATCTCTTGGATTGCAAGTATGA 1740 0.4431 MEAKADADYTQDGTVDFRGQPAVPSRTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTRELHEDTVSSVISVNNWSGSVWITPILGAYIADSYLGRFWTFTISSLIYVLGMSLLSIGVSLKRLKPSTQITFFYTALYTIAIGAGGTKPNISTFGADQFDDFNPNEKELKDSFFNWWMFTSFLGALIATLGLVYIQDNLGWGLGYGIPTVGLLISLLVFYAGTPMYRHKVNKTRSPATEIMSVPIAAFKNRTLQLPTHPSLLYENDSQYYLTTAKRQIHHTPTFRFLDKAAIRQESTSGSPRAPLTVTQVEGAKLIFGMVTIWLVTLIPSTIWAQINTLFVKQGTTLDRKLGSDFRIPAASLGSFVTLSMLLSVPMYDRFFVPFMRQRTGNPRGITLLQRLGIGFSMHIIAIAIAYAVEVKRMHVIKENNAIGPKDVVPMSIFWLLPQYVLIGIADVFHAVGLLEFFYDQSPENMQSLGTTFFTSGIGVGNFLNSFLVTMVDKITGKGESKSWIGDNLNDCHLDYYYGFLLVLSSVNLMVFLWASSRYIYKKESIMVKDGLCVEMEENPSMDASLGLQV* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1261 579 Pfam POT family 98 514 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy20g1261 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 558 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy20g1261 579 Gene3D MFS general substrate transporter like domains 2 557 IPR036259 -
Ahy20g1261 579 CDD MFS_NPF5 30 550 IPR044739 GO:0042937|GO:0042938|GO:0071916
Ahy20g1261 579 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 14 558 - -
Ahy20g1261 579 SUPERFAMILY MFS general substrate transporter 20 544 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1261 Ahy-Chr20 24729577 24737389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1261 4 574 Organic Solute Cotransporters AT2G40460 70.719 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1261 - - adu:107469266 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1261 20 24729577 24737389 Ahy10g0928 10 16780513 16789077 hybridization